KEGG   Saccharomyces cerevisiae (budding yeast): YGL251C
Entry
YGL251C           CDS       T00005                                 
Symbol
HFM1, MER3
Name
(RefSeq) DNA helicase
  KO
K15271  ATP-dependent DNA helicase HFM1/MER3 [EC:5.6.2.4]
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:sce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sce03036]
    YGL251C (HFM1)
Enzymes [BR:sce01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     YGL251C (HFM1)
Chromosome and associated proteins [BR:sce03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    YGL251C (HFM1)
SSDB
Motif
Pfam: DEAD Sec63 Helicase_C ResIII SNF2-rel_dom nSTAND3 UvrD-helicase AAA_19 AAA_11 T2SSE
Other DBs
NCBI-GeneID: 852641
NCBI-ProteinID: NP_011263
SGD: S000003220
UniProt: P51979
Position
VII:complement(join(27921..31426,31579..31636))
AA seq 1187 aa
MKTKFDRLGTGKRSRPSPNNIDFNDQSATFKRNKKNSRQPSFKVGLSYNSLLDDCDDENE
TEEIFEGRGLQFFDKDDNFSITADDTQVTSKLFDHDLEQTPDEEAKKPKKVTIRKSAKKC
LSTTILPDSFRGVFKFTEFNKMQSEAFPSIYESNENCIISSPTGSGKTVLFELAILRLIK
ETNSDTNNTKIIYIAPTKSLCYEMYKNWFPSFVNLSVGMLTSDTSFLETEKAKKCNIIIT
TPEKWDLLTRRWSDYSRLFELVKLVLVDEIHTIKEKRGASLEVILTRMNTMCQNIRFVAL
SATVPNIEDLALWLKTNNELPANILSFDESYRQVQLTKFVYGYSFNCKNDFQKDAIYNSK
LIEIIEKHADNRPVLIFCPTRASTISTAKFLLNNHIFSKSKKRCNHNPSDKILNECMQQG
IAFHHAGISLEDRTAVEKEFLAGSINILCSTSTLAVGVNLPAYLVIIKGTKSWNSSEIQE
YSDLDVLQMIGRAGRPQFETHGCAVIMTDSKMKQTYENLIHGTDVLESSLHLNLIEHLAA
ETSLETVYSIETAVNWLRNTFFYVRFGKNPAAYQEVNRYVSFHSVEDSQINQFCQYLLDT
LVKVKIIDISNGEYKSTAYGNAMTRHYISFESMKQFINAKKFLSLQGILNLLATSEEFSV
MRVRHNEKKLFKEINLSPLLKYPFLTEKKQSQIIDRVSQKVSLLIQYELGGLEFPSYEGA
SKLHQTLVQDKFLVFRHCFRLLKCMVDTFIEKSDGTSLKNTLFLLRSLNGHCWENTPMVL
RQLKTIGLVSVRRLIRHGITNLEEMGHLSDTQIEYYLNLKIGNGIKIKNDISLLPCLNIR
TKLENCKIENEELWLTFKVEISATFKSSIWHGQHLSLDIETEKSSGELIDFRRLQVNKLQ
SPRGFRISAKISPKLEKIEFSIHCQEIAGLGKTIVYSTDHLASQFSAKTPNIRKDLNSLE
KCLFYESSSDGEVGKTSRVSHKDGLEESLSSDDSILDYLNERKKSSKAVESAAVIHPEAH
SSSHFSNGRQVRSNGNYECFHSCKDKTQCRHLCCKEGIPVKYIKEKGPSSIKPVSKPDQI
RQPLLAKNINTTPHLEKRLNSKPKQWQEENTDIATVHTLPSKIYNLSQQMSSMEAGEQVL
KSGPENCPEIIPIDLESSDSYSSNTAASSISDPNGDLDFLGSDIEFE
NT seq 3564 nt   +upstreamnt  +downstreamnt
atgaaaacaaagtttgatcgcctcggtacaggaaaaagaagtagaccctctccaaataat
attgactttaacgaccagtctgctacatttaaaagaaataagaaaaatagccgccaacca
agttttaaagtaggtttgtcttataacagtttactggatgattgtgatgatgaaaatgaa
acagaggaaatatttgagggccgtggtctgcaattcttcgacaaagacgataatttttca
ataacagcagatgatacacaagtaactagtaaattatttgatcacgatttagagcagaca
cctgatgaagaggcgaagaaacctaagaaggtcacgataaggaaatcagcgaagaaatgt
ttgagcacgaccatattaccagattcattcagaggggtttttaaatttacagaatttaat
aaaatgcaatcagaggcttttcctagtatttatgagagtaacgagaactgcataatttct
tcaccaaccggatcaggcaagactgtattatttgaattggcaatattacgtcttataaag
gaaacaaatagtgataccaataacaccaaaattatatacatcgcgccaaccaaatctcta
tgttacgagatgtacaagaactggtttccttcctttgtgaatctttctgttggtatgctt
actagtgatacctcttttctggaaactgaaaaggctaaaaaatgtaacataataattacg
acaccagaaaaatgggatttgttaacaagaagatggtccgattacagccgattattcgaa
ttggtcaaacttgtcctagttgatgagattcataccataaaggagaaaagaggagcatct
ttggaagtaattctgacaaggatgaatacaatgtgtcaaaacattcggtttgttgcttta
agtgcaacagttccaaatatagaagacctagcattgtggctcaaaactaacaacgagctt
cctgcaaatattctttcttttgacgaatcgtacaggcaagttcagttaacgaagtttgtt
tatgggtactccttcaattgcaaaaatgacttccaaaaagatgctatatataattccaaa
ttgattgaaataattgaaaagcatgccgataatcgtcccgtactaatattttgtccgact
agggcttcaactatatcaacagcaaaatttttattaaataatcatattttttcaaaaagt
aagaaaagatgtaatcataatccctccgataaaatattaaatgaatgtatgcaacaaggt
atcgctttccatcatgctggaatttctttagaagaccgtactgccgttgagaaagaattt
cttgcaggttcaattaatatattgtgttcaacttcaacgttagctgttggtgtgaacctt
cccgcatatttggtcattatcaaaggcaccaaaagttggaactcttctgaaatccaagag
tattcagacctagatgtactgcaaatgattgggcgggcaggaagacctcaatttgaaact
cacgggtgcgcagtaatcatgacagactctaaaatgaagcaaacatatgaaaacttaatt
catggaactgacgttttggaaagttcattacatttgaatttgatcgagcatttagcagca
gaaacctctttggaaactgtatattcaattgaaactgcagtaaattggctacgaaacaca
ttcttttacgttagatttgggaagaatccagctgcatatcaagaggtgaacagatacgtt
agttttcattccgttgaagactctcagataaatcaattctgtcagtatttgcttgacacc
ttagtaaaagtgaaaataatcgatatcagcaatggggagtacaaatctacagcgtacgga
aatgcaatgacgcgacattatatatcctttgagtcgatgaaacaattcattaacgcaaaa
aaatttctatcattacaagggatactaaatttactggccacttctgaagagttttcagtt
atgagggtgaggcacaatgaaaaaaaattgttcaaagaaatcaatttatcgccacttttg
aaatatccatttttaaccgagaagaaacagagccaaataattgacagggttagtcaaaag
gtttctcttttgattcaatatgagttaggtgggttagaatttccatcatacgaaggcgct
tctaaactacatcaaactcttgttcaggataaattcctcgtttttagacattgttttaga
ttactaaaatgcatggtagacacatttattgaaaaaagtgatggaacatcactgaaaaat
actttgttcttactgcgaagcctgaatggtcactgctgggaaaacacgccaatggttctt
aggcaattgaaaacaattggactagtttcagtaagaaggctaatacgacatggaattacc
aatctagaagaaatggggcatttgtcagatactcagattgaatactatcttaacctcaag
attggaaacggcataaaaattaaaaacgacatttctttgttgccttgtctgaatattaga
acaaaactagaaaattgcaaaatagaaaatgaagagttgtggttgacatttaaagttgag
attagtgcaacattcaagtctagcatttggcatggtcagcacctctcattagatatcgaa
accgagaaaagctcaggagagttaatcgactttagaagattgcaagttaacaaactacag
tcaccaaggggctttagaatttcagcaaaaatatcaccaaaactagaaaaaatagaattc
tcaattcattgccaagaaatcgccggactcggcaaaacaatcgtatattccactgatcat
ttggcatcacagttctctgcgaagacaccaaatataaggaaagatctaaatagtttagaa
aaatgcctcttctatgaaagcagtagtgacggagaagtggggaaaacgtctagggtttcc
cataaagatggattagaagaatcgctatcctcagatgatagtatactagattatttgaat
gaaaggaagaaatcatcaaaggcggttgaatctgcagcagttattcacccggaggcacac
tcttcttcacattttagtaatggccgccaagtaagatctaatggcaattacgagtgtttt
catagctgcaaagacaaaacgcaatgcagacatttatgttgtaaagagggtattccagta
aagtatataaaagaaaaaggaccctcctcaatcaagccagtatcaaaacctgatcaaata
cgccagccactgcttgcaaaaaatatcaacacaacccctcacctggaaaaaagactgaat
agtaaaccaaagcagtggcaagaagaaaatacagatattgcgacagttcatacacttcct
tcaaaaatttataatctatcgcaacagatgtcgtctatggaagcgggtgaacaagtccta
aaatcaggccccgaaaactgccctgaaataattcctattgatcttgaatcatccgatagt
tattctagtaatacagcggcgagctcaataagtgatccgaatggtgatctggatttcttg
ggttccgatatagagtttgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (58)   

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