KEGG   Saccharomyces cerevisiae (budding yeast): YNL022C
Entry
YNL022C           CDS       T00005                                 
Symbol
RCM1
Name
(RefSeq) rRNA (cytosine-C5-)-methyltransferase RCM1
  KO
K15264  25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311]
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:sce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sce03009]
    YNL022C (RCM1)
Enzymes [BR:sce01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.311  25S rRNA (cytosine2278-C5)-methyltransferase
     YNL022C (RCM1)
Ribosome biogenesis [BR:sce03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   YNL022C (RCM1)
SSDB
Motif
Pfam: Methyltr_RsmB-F NSUN5_N NSUN5_fdxn-like Methyltransf_15
Other DBs
NCBI-GeneID: 855709
NCBI-ProteinID: NP_014376
SGD: S000004967
UniProt: P53972
Position
XIV:complement(591427..592899)
AA seq 490 aa
MNFYRDATWVLEDIEKEAAKERISGSMQTLVLKSCKRYKLKSNPKHIYAVLDSCWKYKPY
LEKVMKKAHILEDIPKKKGKPLFSRLTLLLLCHDLLLSKQKRIQMGKHPIKDYVLKFKSP
LHSEMVKLKLKLKVRELSELVLSEDISNDLPPVRWIRINPLKCHPNGETEPVLAELRKKF
TLKVDKWSELVPGSIYYDEFIPNLFGIHPSDKITAHELYKHGKIIIQDRASCFPAHILNP
GPSDIVIDSCSAPGNKTTHTASYIYPEPPKDNNTRIYAFEKDPERAKVLQKMIKIAGCSP
NISVNVGDFTKLATPEKYKDVTCFIVDPSCSGSGIFGRKFFDSFNRRKIDDKDDDGGIVP
DEQEEFIAKEELQTRLAKLSSFQFQMVKHAMSFPAAKKIVYSTCSIHAEENERVVIDLLL
DKSVREWGWKVAPKREVIPSWPRRGKVEEFEEVFRDGVTYDPQQLAEGCIRALPKSDGGI
GFFAVCFERD
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgaatttctacagggatgcaacatgggtgctagaagatattgagaaggaggctgcaaaa
gaaaggatttccggctctatgcagacgctggtactgaaaagctgtaaaagatataagctg
aaaagtaatccaaaacatatttatgcagttctcgattcgtgttggaaatataaaccatat
ttggagaaagtgatgaaaaaggcacacatattggaagatatacccaagaaaaagggcaaa
ccactcttttcaaggctaactttgttattgctttgccatgatttgctgttgtctaagcag
aaaagaattcaaatgggcaaacaccccatcaaagattatgttttgaagtttaagagccca
ttgcatagcgaaatggtcaaattgaaactcaaattgaaagtaagagagctatctgagttg
gtattaagcgaggatatttccaatgaccttcctcctgttagatggattagaatcaatcca
ttaaaatgccatccaaatggtgagactgagccggtgttagccgaattgaggaagaagttt
actttaaaggtagacaaatggtctgaactagttcctgggtctatctattatgatgagttt
attccaaacttgtttggaattcatccgtctgacaaaattacagcacatgagctttataag
catgggaagattatcattcaagatcgtgcttcttgttttccagcccacattttgaatcca
ggaccaagtgatattgtgatagattcctgctctgctccaggtaataagactacccatacg
gcctcttatatatatcccgaaccaccgaaggacaataatactcgaatatacgctttcgag
aaggatcctgaaagagcaaaagttttacaaaaaatgatcaagatagctggctgttctccc
aacatcagtgtcaatgtaggtgattttacaaagctcgctactcctgaaaaatataaggac
gttacttgttttattgtagatccgagctgctccggtagcggtatatttggtcgtaagttt
tttgactcatttaatagaaggaaaattgatgataaagatgacgatggtggcattgtgccg
gatgagcaagaggagtttatagcaaaggaagaactacagacaaggttagcgaagctgagt
tcatttcagttccagatggtaaagcatgcaatgagtttcccagcggctaaaaaaatagta
tacagcacatgttccattcatgcggaagaaaatgaacgagtcgtcatagaccttctttta
gataagtcagttagagaatggggttggaaagtagcgccaaaaagagaagttattccttct
tggcctagaagaggcaaggtagaagagttcgaagaggtttttagagatggagtcacctat
gaccctcaacagcttgccgagggttgtatcagggcactaccaaaaagtgacggtggtatt
ggtttctttgctgtctgttttgaaagagattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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