KEGG   Saccharomyces cerevisiae (budding yeast): YOR224C
Entry
YOR224C           CDS       T00005                                 
Symbol
RPB8
Name
(RefSeq) DNA-directed RNA polymerase core subunit RPB8
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03020  RNA polymerase
sce03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    YOR224C (RPB8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    YOR224C (RPB8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sce03021]
    YOR224C (RPB8)
   03400 DNA repair and recombination proteins [BR:sce03400]
    YOR224C (RPB8)
Transcription machinery [BR:sce03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     YOR224C (RPB8)
  RNA polymerase III system
   RNA polymerase III
     YOR224C (RPB8)
  RNA polymerase I system
   RNA polymerase I
     YOR224C (RPB8)
DNA repair and recombination proteins [BR:sce03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      YOR224C (RPB8)
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 854399
NCBI-ProteinID: NP_014867
SGD: S000005750
UniProt: P20436
Structure
Position
XV:complement(760825..761265)
AA seq 146 aa
MSNTLFDDIFQVSEVDPGRYNKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLTVTIA
SSLNLEDTPANDSSATRSWRPPQAGDRSLADDYDYVMYGTAYKFEEVSKDLIAVYYSFGG
LLMRLEGNYRNLNNLKQENAYLLIRR
NT seq 441 nt   +upstreamnt  +downstreamnt
atgtctaacactctatttgatgatatattccaagtctcggaagttgatcccggtcgttat
aacaaagtctgccgtatcgaagccgcatctaccactcaggaccaatgcaaactaaccttg
gatataaatgttgaattgtttcccgtcgccgcacaagattctttgacagtgactattgca
tcctctttaaacctcgaagacaccccagctaacgactcttctgcgacaagaagctggaga
cctccacaggctggtgacagatcccttgcagatgattatgattacgtcatgtatggtacc
gcttacaagtttgaggaagtaagcaaggatctaattgccgtttactactcattcggtggc
ctcttaatgagattagaaggtaactatagaaatttgaataacttgaagcaagagaacgct
tatcttttgattcgtcgttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (234)   
   PDB (234)   
Protein domain (1)   
   Pfam (1)   
All databases (251)   

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