KEGG   Saccharomyces cerevisiae (budding yeast): YDL060W
Entry
YDL060W           CDS       T00005                                 
Symbol
TSR1
Name
(RefSeq) Tsr1p
  KO
K14799  pre-rRNA-processing protein TSR1
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:sce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sce03009]
    YDL060W (TSR1)
Ribosome biogenesis [BR:sce03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    YDL060W (TSR1)
SSDB
Motif
Pfam: RIBIOP_C AARP2CN DUF6642 NAD_binding_10 eEFSec_4th
Other DBs
NCBI-GeneID: 851499
NCBI-ProteinID: NP_010223
SGD: S000002218
UniProt: Q07381
Structure
Position
IV:341619..343985
AA seq 788 aa
MAGHSHRSSLKNGHKSYKSKHASKGALKRLYKGKVEKEPVGTGKPDKQVSKLQRKNKAKQ
LRAQRILDSIENRKLFEGKNGAAKIITIVPLVNDLDPLDILYKLLKCADDEGIMVQEVDS
KRIFNVHIKKFKSNLKIIIPDMTNFLNILDCAKVADFVVFGLSGVQEVDEEFGEQIIRAL
ELQGIASYIGVISNLSAVHEKEKFQLDVKQSLESYFKHFFPSEERVYNLEKNSDALNVLR
TLCQRLPRSINWRDNRGYVVADFVDFVETSPDSGDLVIEGTVRGIGFNANRLVHIPDFGD
FQLNKIEKISESSQKRKIIKEKATDSLSLELDLQTVFESNMNRDTLDEYAPEGTEDWSDY
DEDFEYDGLTTARYDDHGFLPGREQTSKKAAVPKGTSDYQAKWYLDDVIDANEEEEAEQT
NGKDETMMEIDDEMMVEQDNEEVAGDEEYDIEDNEGFEELSPEEEERQLREFRDMEKEDR
EFPDEIELEPSESAIERLKRYRGLKNLYNCDWQVDEKDPSSPAEWKRLLRIGNYKNTKNR
IIKETKNEAQAIAGDRIRMFIRFPKFLLEKIQDPKQLLFAVYGLLLHEHKNAVVNFSLQR
WEQYDKPVPSQEPIVVQYGVRRYTIQPLFSQGSNSPNNVHKYERFLHPDTVSVATCIAPV
DFTQSPAIFFKPSPTDAKNIELIGHGTFLNADHSRILAKRAILTGHPFRFHKTVVTVRYM
FFRPEDVEWFKSIPLFTKSGRSGFIKESLGTHGYFKATFDGKLSAQDVVAMSLYKRMWPM
PSLPWNGM
NT seq 2367 nt   +upstreamnt  +downstreamnt
atggcaggtcattcacacaggtcatcattaaaaaacggacacaaatcttacaaatccaaa
catgcttctaaaggtgctttgaaaagattatacaaggggaaagtggaaaaagaacccgtg
ggcactggcaaaccagacaaacaagtttcaaaattgcaacgtaaaaacaaggcaaaacaa
ttaagggcccaaaggatcttggattccattgaaaacaggaaattattcgaaggaaaaaat
ggcgctgccaaaatcattactattgttccgttagtgaatgatttagacccattggacatt
ctttacaagctattaaagtgtgcagatgatgaaggaatcatggtgcaggaagtagactca
aaacgtatatttaatgttcatataaagaagtttaaaagcaatcttaaaatcataattcca
gacatgaccaattttttgaacattttagattgcgctaaagtagcagactttgttgtgttt
gggctcagtggtgtccaagaagtcgatgaagaatttggtgagcagatcatccgtgcgtta
gaactacaaggtattgcttcatatatcggtgtcataagcaacctctcagcagtccatgaa
aaggagaaattccaattggatgtcaagcaatccttagaaagttatttcaagcactttttc
ccaagtgaagaacgtgtttataatttggaaaaaaactcagacgctttaaacgtcttgaga
acattgtgccagaggctaccaagatcaatcaattggagagacaatagaggttacgtagtc
gctgactttgttgatttcgttgaaacctctcccgattctggtgacctggtaattgagggg
accgtccgtggtattggcttcaacgccaatagactggtccatattcctgattttggtgac
ttccaactgaataagatagaaaaaatcagtgaatcttcgcagaaaaggaaaataataaag
gaaaaagctacagatagtctgagcttagagctggatttacaaacagttttcgaaagtaat
atgaatagagatactttggacgaatatgccccagaaggcacggaagattggtcagattat
gacgaggattttgagtacgacggtttgacaaccgcgagatacgacgaccatggcttcttg
ccagggagggaacaaacatcaaaaaaggcggcagttcctaagggaacttctgactatcaa
gcgaagtggtacttggatgacgtcattgacgcaaatgaggaagaagaggcagaacagacc
aatggaaaggatgagacaatgatggaaattgatgatgaaatgatggtggagcaagacaat
gaagaggtagcaggcgacgaagaatatgacatagaggataatgaaggatttgaagagctt
tcacccgaagaagaagaacgtcaactgagggaatttagagatatggaaaaggaggacaga
gagttccccgatgagatcgaactagagcccagtgaatctgccatcgaacgtttgaaaagg
tatagaggtttgaaaaacttatacaactgtgattggcaagttgatgaaaaggacccatca
tcaccagcggaatggaaacgtctattaaggattggcaattacaaaaacactaaaaacaga
atcataaaggaaaccaagaatgaagcacaggccattgcaggtgatcgtattaggatgttc
atcaggtttcctaagtttctgcttgaaaagattcaagatcctaaacaactattatttgct
gtctacggattactacttcatgaacacaaaaatgcggtagtcaacttctctctacaaaga
tgggaacaatatgacaaacctgtgccttctcaggagcctatcgtagtacaatacggtgtt
agaagatacactattcaacctctattttctcaaggctctaacagtcctaataatgttcac
aagtatgaaaggtttctgcatccagatacagtatcagttgccacatgtattgctcccgta
gatttcacccagtcacctgcaatttttttcaagccatcaccaacagatgccaaaaatatt
gaattgattggtcacggtacattcctgaatgcagaccattcaagaatattagcaaagaga
gccattttgaccggtcatccattcagattccacaaaactgtggttactgtacgttacatg
tttttcagaccagaagatgtggaatggttcaagtctatcccactgttcaccaaatcaggt
aggtcaggtttcattaaagaaagtttgggtacgcatggttatttcaaggctacatttgat
ggtaaattatctgcgcaggatgttgttgctatgtccttgtacaaacgtatgtggcccatg
ccttcgttaccttggaatggtatgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (12)   
   PDB (12)   
Protein domain (5)   
   Pfam (5)   
All databases (47)   

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