KEGG   Saccharomyces cerevisiae (budding yeast): YDR235W
Entry
YDR235W           CDS       T00005                                 
Symbol
PRP42, MUD16, SNU65
Name
(RefSeq) mRNA splicing protein PRP42
  KO
K13217  pre-mRNA-processing factor 39
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:sce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sce03041]
    YDR235W (PRP42)
Spliceosome [BR:sce03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    YDR235W (PRP42)
SSDB
Other DBs
NCBI-GeneID: 851821
NCBI-ProteinID: NP_010521
SGD: S000002643
UniProt: Q03776
Structure
Position
IV:933504..935138
AA seq 544 aa
MDKYTALIHDENFSTLTLNVSRYPKSLAYWEKLLNYIVKASAPICKSTEPQLLKLIRCTY
SSMLNEFPYLENYYIDFALLEYKLGNVSMSHKIFQRGLQAFNQRSLLLWTSYLKFCNNVI
SHQKQLFKKYETAEEYVGLHFFSGEFWDLYLEQISSRCTSSKKYWNVLRKILEIPLHSFS
KFYALWLQRIDDIMDLKQLSQLTSKDELLKKLKIDINYSGRKGPYLQDAKKKLKKITKEM
YMVVQYQVLEIYSIFESKIYINYYTSPETLVSSDEIETWIKYLDYTITLQTDSLTHLNFQ
RALLPLAHYDLVWIKYSKWLINSKNDLLGAKNVLLMGLKFSLKKTEIIKLLYSVICKLNE
YVLLRNLLEKIESSYSDNVENVDDFEIFWDYLQFKTFCQNSLYSSRYSDSQSNGLLNKEL
FDKVWKRLSCKEKKSGQEILLNNLVQFYSKDTVEFVEKNIFQKIIEFGWEYYLQNGMFWN
CYCRLIYFDTSRSYLDKRQYIVRKIWPQIDKKFAQSVLPSLTEFCESYFPEEMDTLEEMF
TEEP
NT seq 1635 nt   +upstreamnt  +downstreamnt
atggataaatatactgctttgattcacgatgagaatttttcaactcttacattgaatgtc
tcgagataccctaaaagtttggcatattgggagaagttactgaactatatagtaaaggct
tcggcaccaatatgcaagtccactgagcctcaattattaaagttaatacgatgtacttat
tcttctatgctgaatgagtttccctatctagaaaactactatatcgacttcgcgctactg
gaatacaaactagggaatgtttctatgtctcataagatatttcagcgcggattgcaagcc
tttaaccaaagatctttactattatggacttcatatttaaagttttgtaataacgttatc
tcacaccagaagcagttgtttaaaaaatatgaaacagctgaagaatatgttggtttgcat
tttttcagtggggaattctgggatttatacctggaacaaattagctcaagatgtacgtct
tctaagaaatattggaacgttttgaggaagatactcgaaattcctttacactctttttcg
aaattttatgcattatggttacagcgcatagacgatataatggacctaaagcaattatca
caactaacaagtaaagatgaattattgaagaaactcaagatagacatcaattacagtgga
agaaagggaccgtacctgcaggatgcaaagaaaaagttgaagaaaataacgaaggaaatg
tacatggttgtacaatatcaagtacttgaaatctattccatttttgaatcaaaaatttat
atcaactattatacatcgccagaaaccttggtttcttcagatgaaatagaaacatggata
aaatacttggattataccatcaccttacaaacagattctttaacacatttaaattttcaa
agagctttacttcctctggcccattatgatcttgtatggataaaatacagtaaatggttg
ataaattcaaaaaatgaccttttgggggcaaaaaacgttctattaatgggtcttaaattt
tctttgaagaagaccgaaataataaaactactgtattcagttatttgcaagttaaatgag
tacgtacttttgcgaaatctattggaaaaaattgagtcctcatattccgacaatgttgaa
aacgttgatgattttgagatattttgggactatcttcagttcaaaacgttctgccagaat
tctctgtattccagtcgatattctgattcacaatcaaacgggcttttgaataaggagctg
tttgataaagtatggaaacgtttgagttgtaaagaaaaaaaaagtggtcaagaaatttta
ttgaataacttagtacagttttattcgaaggataccgtagaatttgtagaaaagaacata
tttcaaaagataatagaatttggttgggagtactacctacagaacggtatgttctggaac
tgttattgccgtttaatttatttcgacacttctaggtcatatttggacaagaggcaatat
attgtcagaaaaatatggccccaaatagacaaaaaatttgcacagagcgtcttgccgtct
ttaacagaattctgtgagtcatacttcccagaggagatggatacattagaggaaatgttt
actgaagaaccttag

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (7)   
   PDB (7)   
All databases (44)   

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