KEGG   Saccharomyces cerevisiae (budding yeast): YGR278W
Entry
YGR278W           CDS       T00005                                 
Symbol
CWC22
Name
(RefSeq) U2-type spliceosomal complex subunit CWC22
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:sce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sce03041]
    YGR278W (CWC22)
Spliceosome [BR:sce03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    YGR278W (CWC22)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    YGR278W (CWC22)
SSDB
Motif
Pfam: MA3
Other DBs
NCBI-GeneID: 853195
NCBI-ProteinID: NP_011794
SGD: S000003510
UniProt: P53333
Structure
Position
VII:1046731..1048464
AA seq 577 aa
MSTATIQDEDIKFQRENWEMIRSHVSPIISNLTMDNLQESHRDLFQVNILIGRNIICKNV
VDFTLNKQNGRLIPALSALIALLNSDIPDIGETLAKELMLMFVQQFNRKDYVSCGNILQC
LSILFLYDVIHEIVILQILLLLLEKNSLRLVIAVMKICGWKLALVSKKTHDMIWEKLRYI
LQTQELSSTLRESLETLFEIRQKDYKSGSQGLFILDPTSYTVHTHSYIVSDEDEANKELG
NFEKCENFNELTMAFDTLRQKLLINNTSDTNEGSNSQLQIYDMTSTNDVEFKKKIYLVLK
SSLSGDEAAHKLLKLKIANNLKKSVVDIIIKSSLQESTFSKFYSILSERMITFHRSWQTA
YNETFEQNYTQDIEDYETDQLRILGKFWGHLISYEFLPMDCLKIIKLTEEESCPQGRIFI
KFLFQELVNELGLDELQLRLNSSKLDGMFPLEGDAEHIRYSINFFTAIGLGLLTEDMRSR
LTIIQEVEDAEEEEKKLREEEELEKLRKKARESQPTQGPKIHESRLFLQKDTRENSRSRS
PFTVETRKRARSRTPPRGSRNHRNRSRTPPARRQRHR
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgtctaccgctaccatacaggatgaagacattaaatttcagagagaaaactgggaaatg
ataaggtcacacgtttcacccataatatccaatttaacaatggacaacttacaggaatcg
cacagagacttatttcaagtcaatatacttattggccgcaacataatttgtaaaaatgtt
gtggattttactctgaacaaacagaatggcaggctaatccctgctttatccgctttgatt
gccttgctaaattctgatattccagatattggagaaactttagcaaaagaactaatgtta
atgttcgtgcagcaattcaatcgcaaagattacgtgtcctgcggaaatatccttcaatgt
ctgtccattttatttctttatgatgtaattcatgaaatcgtgatcttacagattctattg
ctactccttgaaaagaattctttacgactggtcattgccgtgatgaaaatatgtggctgg
aaacttgcacttgtcagtaagaaaacccatgatatgatttgggagaagttaagatatatt
ttgcaaacacaggagttatctagtacactacgtgagtcgttagagactctgtttgaaata
aggcaaaaagattataaatctgggtctcaaggtctgtttatattggacccaactagttac
acagttcatacgcactcctatattgttagtgatgaggatgaagccaacaaagaactggga
aattttgaaaagtgtgaaaatttcaatgaactaaccatggcgtttgatacgctacgacag
aagctgctgataaataatacgtccgacacaaatgaaggtagtaacagtcaattacaaatc
tatgacatgacatctaccaatgatgtcgagtttaaaaagaagatttatttggttctgaaa
agttcattatcaggtgacgaagcggctcacaaattgctaaaattaaagattgcgaacaat
ttgaaaaaaagcgtggtagatataatcatcaaatctagtttgcaggaatctacattctct
aaattttattctattttgtccgaacgtatgataacgttccacaggagttggcagacagct
tacaatgaaacttttgagcagaattatacacaagatatcgaagattatgaaactgaccaa
ctgcgaatcttaggtaagttttggggacacttaatatcttatgaatttcttccaatggac
tgtcttaagataattaagttaactgaggaagaatcgtgtcctcaaggaagaattttcatc
aaatttttatttcaagagctcgtaaatgagctcggattagatgagctgcaattaaggcta
aactccagcaagcttgacggaatgtttccgctggaaggagacgccgaacatataagatac
tccataaatttctttactgccataggattgggcctgctcacagaggacatgagaagccgg
ttgacaattattcaagaagttgaggatgcagaggaagaagaaaaaaaattgagagaagag
gaggaacttgaaaagttacggaagaaggccagagagtcacaaccaacccaagggccaaaa
attcacgaatccaggttatttttacagaaggacaccagagaaaatagtagatcaagatcg
ccattcacagtggaaacaagaaaacgtgctagatccagaactccaccaagaggatcgaga
aaccatcgtaacagatccaggactccgcctgcaagaaggcaacggcatagatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (13)   
   PDB (13)   
Protein domain (1)   
   Pfam (1)   
All databases (46)   

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