KEGG   Saccharomyces cerevisiae (budding yeast): YKL014C
Entry
YKL014C           CDS       T00005                                 
Symbol
URB1, NPA1
Name
(RefSeq) Urb1p
  KO
K14861  nucleolar pre-ribosomal-associated protein 1
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:sce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sce03009]
    YKL014C (URB1)
Ribosome biogenesis [BR:sce03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    YKL014C (URB1)
SSDB
Motif
Pfam: Npa1 NopRA1
Other DBs
NCBI-GeneID: 853855
NCBI-ProteinID: NP_012911
SGD: S000001497
UniProt: P34241
Position
XI:complement(411619..416913)
AA seq 1764 aa
MSNHSEAYGSRDQRREKYTQGKEFEDGTLETLESIISAVEDETLSKDYQPLIVFFQRGFG
AQLVQTWSYYAQVNNHGKFSKTTSLLTKTLRVLSSDTSTVTIGSGLIRLILTDYTKVLYR
GLNNMRAQLTNPILRLLKQIVNFNNGQHIEELVSYFDFSLPILPRLLVPSKSELANGNSS
ADSSKHDSLRFTFIKFWLTLISNASPFVRKELLTENFKIMSNLFKFMNKADSDKLSEHIL
SVFINDILKEKSFKRTTKTKILNELAASKIHHFYYSSNKNLVKKANEFFLTFGASRDFSV
AFPDNCVWFKNSVADGASHGAPITVNQVEFQIHNKLLFNTLRLFKPWEDTLQLGTLIKIL
ENVPELVAPYSIFLTTNGNYDPKMTSYWFGITLLINKIINLKIPQFMEKVDSNIPPATSL
VIENILPSLLTKSSLVKSLQFETPIIRQLACQSIVLALKKLEKVSTFYDQKGWRNEKTIL
LNEFHTRIPDLPIFVSTLSNSLASNKDNRILPLSISIIFNYYSKMFPNLFSINLPSSNIY
TDIMQKSKISGIEFAILDNYLQFQEFNSTQTRWWNPSSGGNSLFTLLLKLASSKNASNVI
TTRISNLLDELTRTNVIFNISLISPVMALVNSLQGLSLQVSEIDNMEQVWKWFDETISRV
VKTPYKYVDMAKEYNYISPFIMCLSEQWKYVDKSGNPEFLIKWLILFLRNMIFIGEDHIG
IDKLVKNVFPEVSDHDVNIYLKLDSFEENIKKTNSSNSLISSMKSSSFFQYISALPSKNL
MNISRLPVNKLDAAGILFRVQLLVEDDSVVYDNWFEATACELTGKIASYMVTDTEFPIIK
VLERYINFALPKLAIEKRNALLMKKSRFMCNLIGAVCFETGHQLVEFREIIQKVVFSGEN
VEEYANYNELYQKEDVNAFLTSVSEYLSTSALTSLLMCSTKLESTRNILQKLFNEGKTIK
ISLVKNILNKAANEDPASIKEVNISLAKFFEENKVCVDASSDPMGKLSLSETTSLINSFV
SSDLNYLVLKAFYRWEHFSFPSFIPSIWRIKDSPLLSIVTTAALFKHMQDKDFSAFAHET
ISKYGNEIAKSTYTTSKSEIFDEILNMITTYIDFYDETKRNEILKCVLSQSDHKYHAATV
RYIAAHNNFTYPGVETWLHKTLLYLTKYLSERKVISNSFFELLRAMAELLKLEEVPNKLN
VKIINSQLEAILGSEWIKQIKVLEYVIVLIFCVSKKSIQSQRMVQLLLSNDSYSSIMIKD
NDEDSSYRKFLSTMILFSLFSIDPVVNSTPIVQEKLLTFYSGTISSNDKLILKILETIES
HTATSWTNMIFSWEFIKDEEEEILEAIGDTRLITKEREGLILTLQKNMIKKSIDRYVLER
PQVPELYTDSNTNNYDATTRCDLVKKYYDDTERSGVDMYDPLFLLLLIIHNKELVKMVKD
DEGNVTYRYEFENFLDCKIFQFIICSLSDCHTVANISYEHLSNLASSLEKKTAQMNLEKQ
ITSKDNERKESDSDLIKYNSIYQVLIKRILYQRQQNQDPINPLIWFSISRIVDLLGSPTA
PLHEKAYRWVLSNSTIRSWDIPMVSDVMMSYNKRQQDDNKKEIDMEIYYGELSWVLTTIC
KGIKTDEDYKMLEKKGVFEWLLNLINMPYLKERLRELIYFIFYKVQRVADDGGLNLISRN
GIVSFFEVLNNNIKSRLPQDDILNNIGTLRNENRGTLNTTLRLAQEQNGIEKLLLGYNEL
VKSQKRLILWTEGDSDNVVKRLRK
NT seq 5295 nt   +upstreamnt  +downstreamnt
atgagtaatcatagcgaagcctatggatctcgcgaccagagaagggagaagtacacccaa
gggaaagagttcgaagacggtacattagaaacactagaaagtataatcagtgcagtcgaa
gatgaaactctctccaaagattaccaacctctaatagtgttcttccaaagaggatttggt
gctcaattggtacagacttggtcatattatgctcaagtaaataaccatgggaaattctcg
aaaactacctcattactgactaaaaccttacgagttttgtcatctgatactagtacagtg
actattgggagcggtctaattagattgatattgaccgattacacaaaagttctctataga
gggttgaacaatatgcgtgcgcaattaactaatccaattcttcgtctactcaaacaaata
gtcaatttcaacaatgggcaacatatagaggaattagtttcatatttcgatttttcatta
cctattttaccaagactgttggtaccaagcaagtctgagttagccaatgggaattcatct
gctgattcatccaaacatgactcattaagatttacatttatcaagttttggttgacattg
atctcaaatgcttccccattcgtgagaaaagaacttttgacagaaaactttaagattatg
agcaacctatttaaattcatgaataaggctgattctgacaagttatctgagcacatacta
tcggtattcataaacgacattttaaaggagaaatccttcaagagaactactaaaaccaaa
attttaaatgaactagcggcttcaaagattcatcacttttattattcatcaaacaagaat
ttggttaagaaggcaaatgagtttttcttaacttttggagcttcccgtgactttagcgta
gcatttcctgataattgcgtttggttcaaaaattcagttgctgatggagcttctcatgga
gctccgataaccgtcaaccaagtggaatttcaaattcataataaacttttgttcaacact
ttacgccttttcaaaccttgggaagatacgctgcaattaggtacgttgatcaaaatattg
gagaacgttcccgaacttgttgctccttacagcatctttttaacgacgaatggtaactat
gaccctaagatgacttcgtattggtttggtataacgttactgattaacaagattattaat
cttaagataccgcaatttatggagaaagttgatagcaatattccacctgccacttcatta
gttatagaaaacattctgccatctttgctcaccaaatcctcgttggttaaatccctacaa
tttgaaacacccatcataagacaattagcctgtcaatcaatagttctagcgttaaaaaaa
ttagaaaaagtttccacattttatgatcaaaaaggctggagaaatgaaaaaactatttta
ctcaacgagtttcatactagaattcctgatttaccaatcttcgtatctactttgagcaat
tctttggcttccaataaggataatagaattttacctctgtccatatccatcatattcaac
tactatagtaaaatgttccccaacctcttctcaattaacctaccatcatcaaatatttac
acagatatcatgcaaaaatccaagatttctggcatagaatttgctattctggacaactac
ttacaatttcaagaatttaactctactcaaaccaggtggtggaatccaagttctggtgga
aattctttattcaccctactattaaagctagcatcctccaaaaatgcttctaacgtgata
actacaagaatatccaacttgctcgatgagctgacgagaacaaacgttatcttcaacata
tctttaatttcaccagtgatggctttagtgaatagtcttcaagggctttcccttcaagtt
tctgaaattgacaacatggaacaagtctggaagtggtttgacgaaactatatctcgtgtc
gtaaaaacaccatacaagtacgtcgatatggcaaaagagtataactacatttctcccttc
ataatgtgcctttcagagcaatggaaatacgttgacaagagtggaaacccagagttttta
attaaatggcttatactttttcttagaaacatgattttcattggtgaagaccatataggc
atagataaacttgttaaaaatgtctttcctgaggtctctgatcatgatgttaatatatac
ttgaaacttgactcatttgaagaaaacataaagaaaactaatagctctaattctttaatt
tcttcaatgaagagctcatcttttttccagtatatttcggcgcttccatctaaaaatcta
atgaatatttctagattaccagtgaacaaattagatgcggcaggaatcctttttagagtt
cagttattggtagaagacgattctgttgtatatgacaattggttcgaagcaactgcctgt
gagttaactggcaagattgctagctacatggtaacagacacagaattcccaattatcaaa
gttttggaaaggtatataaatttcgctttaccaaaactggccattgaaaaaagaaatgct
ctactcatgaaaaaatcaaggttcatgtgcaatttaatcggtgcagtatgctttgaaaca
ggccatcaattagtggaattccgagaaataattcaaaaagtcgtgtttagtggtgaaaat
gtcgaagagtatgccaactataatgagttgtatcagaaagaagatgtaaatgctttctta
acaagtgttagtgagtatttaagtacttcagctttaacttcgctactcatgtgtagcacc
aaactagagtccacaagaaacattctccaaaaattattcaacgaaggaaaaactataaaa
atatcccttgtaaagaatatactgaacaaagctgcaaatgaagatcctgcttcaattaag
gaagtaaacatctctttggctaaattttttgaagaaaacaaagtttgtgttgatgcttca
tctgatcctatgggtaagctatccctttcagaaactacttctctgataaatagttttgtg
tctagtgatttgaattatctagtactgaaagctttttacagatgggaacatttttctttc
ccatctttcataccaagtatctggaggatcaaggattcacctttactaagtattgtaaca
acggctgctttgttcaagcacatgcaggataaagattttagcgcatttgcgcatgaaacc
atttccaagtatggtaatgaaattgcgaaaagtacttacactacctcgaaaagtgagatt
tttgacgaaatattaaatatgattaccacttatattgatttctatgacgaaacgaaacga
aatgaaattttgaaatgtgttttatcacagagcgaccataaatatcatgctgctacagta
agatacatagctgcacacaataattttacttatccaggggtagaaacatggttacataaa
actcttctttaccttacaaagtacctttcagaaagaaaagttatctccaattcttttttt
gagttactaagagcgatggctgagctcttaaaacttgaagaggtaccaaataagttgaat
gtcaaaatcattaattctcaattagaggctattctaggcagtgagtggatcaaacaaatt
aaggttcttgaatacgttattgtattaattttttgtgtgagcaaaaagtcaattcaatcg
caaagaatggttcaacttttattaagcaatgacagttactcatcaataatgattaaagac
aatgatgaagattcatcgtatcgaaagttcttaagcacaatgatattattctctttattc
agcatcgacccggtcgtaaattcgacgccaatagttcaagagaaattattgactttttac
tccggtactatttccagtaacgacaagttgatactgaaaattctagaaactatcgaatct
cacaccgctacttcatggacaaacatgattttttcttgggaatttatcaaagacgaagag
gaagaaatcttggaagccattggagacacgaggctgattaccaaagaaagggaggggttg
atactaacactacaaaaaaacatgatcaaaaagtccattgacagatacgtattggaaagg
cctcaagtccctgaattatataccgattctaatacaaacaattatgatgctactacaagg
tgtgacctagtcaaaaagtactacgatgataccgaacgatctggtgttgatatgtacgat
ccattatttttactgctattaataatccataacaaagagctggtaaaaatggtcaaagat
gacgagggcaatgtaacatacagatatgaatttgaaaatttccttgattgcaaaatattt
cagtttattatttgctcattaagcgattgtcataccgttgccaatataagttacgaacat
ttatcaaatttagcttcttctttggagaagaaaactgcccagatgaatcttgaaaagcaa
ataactagcaaggataatgaaagaaaagaatctgatagcgatttaatcaaatataatagc
atttaccaagtgttgattaaaaggattttataccagagacaacaaaatcaagatcctatc
aatccgttaatttggttttctatctctagaattgttgatctattgggaagtccaactgcg
cccttacatgagaaggcataccgctgggtattatcaaattctaccatacgtagttgggac
atccctatggtatctgatgtgatgatgtcctacaataagagacaacaagatgacaataag
aaagaaattgatatggaaatatactatggagaattgagttgggttttaacaaccatttgt
aagggaattaaaacggatgaagattacaagatgttagagaagaaaggtgtatttgaatgg
ttgttaaacttgatcaatatgccatacttgaaagaaagattacgcgaactaatctatttt
attttttacaaagtccaaagggtagcagatgatggtggtttgaatttaattagcagaaac
ggtattgtgtcgtttttcgaggttttgaacaataacatcaaatctagactaccacaggac
gatatactgaacaacattggtactttacggaacgaaaacagaggtacattaaatactact
ttgaggttagcccaagaacaaaacggaattgaaaaactactattaggctacaacgagctt
gtcaaatcacaaaaaaggctaatattatggacagaaggtgatagcgacaatgttgtcaag
aggctacgtaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (64)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (59)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (73)   

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