KEGG   Saccharomyces cerevisiae (budding yeast): YNL222W
Entry
YNL222W           CDS       T00005                                 
Symbol
SSU72
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    YNL222W (SSU72)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sce03021]
    YNL222W (SSU72)
   03019 Messenger RNA biogenesis [BR:sce03019]
    YNL222W (SSU72)
Enzymes [BR:sce01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     YNL222W (SSU72)
Transcription machinery [BR:sce03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     YNL222W (SSU72)
Messenger RNA biogenesis [BR:sce03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     YNL222W (SSU72)
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 855499
NCBI-ProteinID: NP_014177
SGD: S000005166
UniProt: P53538
Position
XIV:229094..229714
AA seq 206 aa
MPSHRNSNLKFCTVCASNNNRSMESHKVLQEAGYNVSSYGTGSAVRLPGLSIDKPNVYSF
GTPYNDIYNDLLSQSADRYKSNGLLQMLDRNRRLKKAPEKWQESTKVFDFVFTCEERCFD
AVCEDLMNRGGKLNKIVHVINVDIKDDDENAKIGSKAILELADMLNDKIEQCEKDDIPFE
DCIMDILTEWQSSHSQLPSLYAPSYY
NT seq 621 nt   +upstreamnt  +downstreamnt
atgcctagtcatcgcaattcaaacttgaagttttgcacagtttgtgcatcaaacaacaat
cgttcaatggaatcgcataaagtcctgcaagaagcaggctataatgttagctcttacgga
acaggttcagctgtgagactgcctggtctatcgatagataagcctaatgtgtactcattt
ggtacaccctataatgatatatataatgatcttttatcacaatcagcagaccgttacaag
tcgaacggtttattgcaaatgctggatcgtaatagaagactcaaaaaagcacctgaaaaa
tggcaagaaagtacaaaagtcttcgacttcgttttcacttgtgaagagagatgttttgat
gccgtttgtgaagatttgatgaatagaggtgggaaattaaacaaaatagtgcatgtaatt
aatgttgacattaaagatgatgatgaaaatgctaaaattggtagcaaagctatattggaa
ttagctgatatgctcaatgataaaatagaacaatgtgaaaaagatgacattccctttgaa
gattgtataatggacattttaactgagtggcaaagctcacattctcaactaccgtcatta
tacgctccttcatattactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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