KEGG   Saccharomyces cerevisiae (budding yeast): YPL104W
Entry
YPL104W           CDS       T00005                                 
Symbol
MSD1, LPG5
Name
(RefSeq) aspartate--tRNA ligase MSD1
  KO
K01876  aspartyl-tRNA synthetase [EC:6.1.1.12]
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    YPL104W (MSD1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sce01007]
    YPL104W (MSD1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sce03016]
    YPL104W (MSD1)
   03029 Mitochondrial biogenesis [BR:sce03029]
    YPL104W (MSD1)
Enzymes [BR:sce01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     YPL104W (MSD1)
Amino acid related enzymes [BR:sce01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   YPL104W (MSD1)
Transfer RNA biogenesis [BR:sce03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    YPL104W (MSD1)
 Prokaryotic type
   Other AARSs
    YPL104W (MSD1)
Mitochondrial biogenesis [BR:sce03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    YPL104W (MSD1)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d tRNA-synt_2b
Other DBs
NCBI-GeneID: 856000
NCBI-ProteinID: NP_015221
SGD: S000006025
UniProt: P15179
Position
XVI:355700..357676
AA seq 658 aa
MLARSRVCLQTITRRLADFPEANAIKKKFLFRKDTSTIKQLKGLSSGQKIVLNGWIEQKP
KRVGKNLIFGLLRDSNGDIIQLVDNKSLLKGFTLEDVVQAVGILSLKRKLSNEDADEYEV
QLEDITVLNASNKKPAQMQDFKLSAIYPPEFRYLQLRNPKYQDFLKKRSSISKEIRNSFN
NFDFTEVETPMLFKATPEGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKY
YQMARCFRDEDLRADRQPEFTQVDMEMAFANSEDVMKIIEKTVSGVWSKFSKKRGLLTLD
SKGTLVPAKKENGTVSIFRMTYEQAMTSYGIDKPDLRAPDLKIINLGEFNAFSHLNKKFP
VFEVIILRSAFSNMEEYKERWSFLTNNSNYNYRVPIVLPIENDEQANSNWFENFHAIATF
ENPHLITKFLKLKKGDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHGKNIYHAVNKDV
ASWIVDFPLFSPVIIEDKSGKKEKLAYPEYEKDRLCSTHHPFTMVKLKDYEKLEKTPEKC
LGRHYDLVVNGVELGGGSTRIHDPRLQDYIFEDILKIDNAYELFGHLLNAFDMGTPPHAG
FAIGFDRMCAMICETESIRDVIAFPKSITGADLVVKSPSVIPESILEPYNIKYSNSKK
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgttggcccgttccagggtgtgcttgcagacaatcactagacggttggcagactttcca
gaagccaatgctattaagaaaaaatttctctttaggaaggacacctcgaccatcaaacag
ttaaaaggactgtctagcggccagaaaatagtactcaatggatggatagagcagaagcca
aaaagagttgggaaaaatttgatcttcggacttttaagggactctaacggtgacattatc
cagttggttgataacaaatcgttgttgaaaggctttactttagaggatgtggttcaagcc
gtaggtatactctctttgaagaggaagctatcaaatgaggacgcagatgagtacgaagtg
caattggaggatattactgtgttaaatgcatctaataaaaaaccagcgcaaatgcaggat
tttaaattgtcagccatatacccacctgagttccgctatttgcaattgagaaatcccaaa
tatcaagattttttaaagaagaggtcatctatctctaaggaaataagaaactccttcaac
aattttgattttacggaggtcgagaccccaatgttatttaaagctaccccagaaggcgca
agagagtttctggttccaacaaggacaaagagatccgatggtaaaccatcgttttatgct
ctagatcagagccctcaacaatacaagcaactcttaatggctagtggtgtcaacaaatat
tatcaaatggcaaggtgctttagagatgaagatttaagagcagacaggcagcctgagttt
acacaggttgatatggaaatggcctttgctaattctgaagatgtcatgaaaatcatagaa
aagacagtttctggggtatggagtaaattttccaaaaaacgaggattattgactttagac
agtaagggtacattagtgcctgcgaaaaaggaaaacggcacagtatctatctttcgtatg
acctacgaacaagccatgacctcatatggtattgacaagccagatttgagagcgccagat
ttgaagattatcaatttaggcgagttcaatgcctttagtcatttgaacaaaaaatttccc
gtttttgaagtaattattctaagaagtgccttttcaaatatggaagagtacaaagaacga
tggtcgtttctgacaaataacagtaattacaattatagagttccaatagtgctaccaatt
gaaaatgacgaacaagctaattcaaattggtttgagaattttcatgcaattgccacgttt
gaaaacccacatctaataaccaaatttctgaaactgaaaaaaggtgacattgtatgcggt
tgtacgagagagccaaaccattccattttcgagaatcctactcccctgggaagattgaga
cagttggtgctacaaagtgagcatgggaaaaatatctatcatgctgtcaataaggatgtt
gcctcatggattgtggatttcccgttattttctcccgttataattgaagataagtctggt
aaaaaagaaaagcttgcatatccggagtacgaaaaggatagactatgttccacgcatcat
ccttttactatggtgaagcttaaagactacgaaaaattagaaaagacgccggaaaagtgc
ttgggtcggcattatgacctcgtagttaacggtgtggaacttggtggtggctcaacaaga
attcacgatccaagattacaagactatattttcgaagatatcctcaaaatagataatgca
tatgaactatttggccatttactgaatgcttttgatatgggaacaccgccacacgctgga
tttgctattggttttgatcgtatgtgcgctatgatctgtgaaactgagagtataagggac
gtaatcgccttcccaaaaagtattaccggggctgatttggttgtcaagagtccaagtgtg
atacctgaaagcattctggaaccttacaatatcaagtatagtaattcaaaaaaatga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

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