KEGG   Sphingobium chlorophenolicum: Sphch_0523
Entry
Sphch_0523        CDS       T01522                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K03655  ATP-dependent DNA helicase RecG [EC:5.6.2.4]
Organism
sch  Sphingobium chlorophenolicum
Pathway
sch03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sch00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Sphch_0523
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sch03400]
    Sphch_0523
Enzymes [BR:sch01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Sphch_0523
DNA repair and recombination proteins [BR:sch03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Sphch_0523
SSDB
Motif
Pfam: DEAD Helicase_C RecG_dom3_C ResIII RecG_wedge Flavi_DEAD AAA_30 SecA_DEAD SLFN-g3_helicase
Other DBs
NCBI-ProteinID: AEG48218
UniProt: F6EXH1
Position
1:548234..550297
AA seq 687 aa
MRPDILNPLFTEIEALKGVGPALAKPLERLGLARAVDVAFHLPVSFIDRRMVDELILSDS
GRVIGIQLTPTDYRASGSARAPFRVIAQDRHGNSVALVYFGRNSAWPRKLLPLGEPKFVS
GKLEAYGDNLQIVHPDYVLPPEEAATIPAREPVYGLSEGLTNNRLRDLVAQSLSRASVLP
EWIEPSLLARKGWPAWREALTRIHADPSDAQARERLAYDEIFAGQLALMLVRQSSRKRRG
IPIAGDGRLRAMLQLPFAPTGAQRRAFGEIEGDMAQPVPMLRLLQGDVGSGKTLVALMAL
LNTVEAGAQGALLAPTEILARQHYETLRKMASGLPVTIAILTGREKGKTRESTLMGLADG
SIDILVGTHAIFQEAVRYKNLALAVIDEQHRFGVAQRMMLTSKAERAPHLLVMTATPIPR
TLTLTYYGEMDVSRLDEMPPGRQPIQTVVMSANRLDEVVEALARHVEGGGQAYWVCPLVE
ESETSDQAAAEARAEMLKMRFGPLVGLVHGRMKGPEKDAAMEAFASARTKILVATTVIEV
GVDVPNSNLIIIEGAERFGLAQLHQLRGRVGRGQNHSVCILLRGGALSETSRARLALMRE
TNDGFRIAEEDLRLRGAGEILGTRQSGEQQLKLATPEHLSALLDSARDDAHLLIDRDGGL
TEARGEAARTCLYLFERDAAVGLLRSG
NT seq 2064 nt   +upstreamnt  +downstreamnt
atgcgacccgacatcctcaacccactcttcaccgaaatcgaagcgctcaagggcgtaggc
ccggcgctggccaagccgctggagcggctgggccttgcccgcgccgtggatgtggccttt
catttgccggtcagcttcatcgaccgccgcatggtggacgaactgattctttccgactcc
ggccgcgtcatcgggattcagctcaccccgaccgactatcgcgcctcgggcagcgcccgc
gccccctttcgtgtcatcgcgcaggacaggcacggcaacagcgtcgcgctggtctatttc
ggccgcaacagcgcatggccgcgcaagctgttgccgctgggcgaacccaaattcgtctcc
ggcaagctggaggcctatggcgacaatctccagatcgtccatcccgactatgtcctcccg
ccggaagaagccgccaccatcccggcgcgcgagccggtctatggcctttccgaaggcctc
accaacaaccgcctgcgcgatctggtcgcccagtcgctgagccgcgcgtctgtcctcccg
gaatggatcgaacccagtctgcttgcccgcaagggctggcccgcatggcgcgaagcgctt
acccgcatccacgccgaccccagcgatgcccaggcccgcgaacggctggcctatgacgaa
atcttcgctggccaactcgcgctgatgctggtccgccaatcgtcccgcaagcgaaggggc
attcccatcgccggagacggccgcctgcgtgccatgctccaactgcccttcgccccgacc
ggcgcgcaacgccgcgccttcggagagattgaaggcgacatggcccaacccgtccccatg
ctccgcctgctgcagggcgatgtcgggtccggcaagacgctggtggcgctgatggcgctg
ctcaacacggtggaggcgggggcgcaaggcgcgctcctcgccccgaccgaaatcctcgcc
cgccagcattatgagacgctgcgcaaaatggcgtcgggcctgcccgtcaccatcgccatc
ctcaccggccgggaaaagggcaagacccgcgaatccacgctgatgggccttgccgacggc
agcatcgacatactcgtcggcacccacgccatctttcaggaagcggtgcgctacaagaat
cttgcccttgcggtgatcgacgagcaacatcgcttcggcgtggcgcagcgcatgatgctc
acctccaaggccgagcgcgcgccgcatttgctggtgatgacagccaccccgatcccgcgc
accctgacgctcacttattatggcgaaatggacgtatcccgcctggacgagatgccgccg
ggccgtcagccgatccagaccgtcgtcatgtccgccaaccggctggacgaagtggtcgag
gcgctggcccgccatgtggagggcggcggccaggcctattgggtttgcccgctggtcgag
gaaagcgaaaccagcgaccaggcggccgccgaagcccgtgccgaaatgctgaagatgcgc
ttcggtccattggtcggcctggtccatggccgcatgaaaggcccggaaaaggacgctgcg
atggaggccttcgcctccgcccgcacgaaaatcctcgtcgccactacagtcatcgaggtc
ggcgtcgacgtgcccaacagtaacctcatcatcatcgagggggcggagcgcttcggtctg
gcgcagcttcaccagcttagaggccgggtgggccggggccagaaccacagcgtctgcatc
ctgcttcgcggtggcgcgctgagcgaaaccagccgcgcgcgtctggccctgatgcgggaa
accaatgacggcttccgcatagccgaggaagacctgcgcctgagaggagcgggcgaaatc
ctcggcacccgccaatcgggggagcagcagcttaaattggccacccccgaacatctttcg
gccctgctggattcggctagagacgacgctcatctgctcatcgaccgggacggcggcctg
accgaagccaggggggaggcggctcgaacctgcctctatctctttgaacgcgatgctgcg
gtgggtttgcttcgcagcggttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system