KEGG   Sphingobium cloacae: SCLO_1029300
Entry
SCLO_1029300      CDS       T05301                                 
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
sclo  Sphingobium cloacae
Pathway
sclo00300  Lysine biosynthesis
sclo00550  Peptidoglycan biosynthesis
sclo01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sclo00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SCLO_1029300
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    SCLO_1029300
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sclo01011]
    SCLO_1029300
Enzymes [BR:sclo01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     SCLO_1029300
Peptidoglycan biosynthesis and degradation proteins [BR:sclo01011]
 Precursor biosynthesis
  Amino acid ligase
   SCLO_1029300
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase LpxD
Other DBs
NCBI-ProteinID: BAV65970
UniProt: A0A1E1F625
Position
SCLO_1:3360393..3361838
AA seq 481 aa
MTRLGSLIEELDVEVGENAGLDTSVTGFAIDNRKVAPGTVFGAFQGLRVNGEDYIPDAVK
AGAVAIVARPEAKVEGAVHIAHPNPRRLFALLAARYFAPFPDVTVAVTGTNGKTSTVELT
RQLWRMMGHKSASIGTLGVTTSVDQVSTGLTTPDIVTFLSNMSGLKREGITHAAFEASSH
GLAQYRTEGLPVVAGAFTNLSRDHLDYHGDMDSYFDAKMRLFDEVVARGGAAVVWADDPW
SDKVVERATKRGLRLLSVGVKGQALRLANRTPTQLGQTLEIEADGEFYKVNLPLIGAYQA
ANALTAAGLVVATGGDVAKVLELLGRVQPVRGRLERAVISKAGAPVYVDYAHTPDGLRAA
IEALRPHTKGRLVALFGAGGDRDAGKRPLMGKVATELADHVIVTDDNPRSEDPSAIRAAV
MAGAPGAEEIGGRRAAIAAAIAQAGADDIVLLAGKGHEQGQIIGDRVLPFDDVTVARECA
G
NT seq 1446 nt   +upstreamnt  +downstreamnt
gtgacgcgcctcgggtcgctgatcgaggagctggatgtcgaggtcggcgaaaacgccggc
ctcgacacgtccgtcacgggcttcgccatcgacaatcgcaaggtcgcgccgggcaccgtc
tttggcgcgttccagggcctgcgcgtcaatggcgaggattatattcccgacgcggtgaag
gcgggggccgtcgcaatcgtcgcccggccggaagcgaaggtcgagggcgcggtccatatc
gcccatcccaatccgcgccgcctgttcgccctgcttgccgcgcgctatttcgcgcctttc
ccggatgtgacggtcgccgtcaccggcaccaacggcaagacatccaccgtggaactgacg
cggcagctctggcggatgatggggcacaagtcggcttccatcgggacgctgggggtcacc
acctcggtcgatcaggtgtcgacggggttgaccacgccggacatcgtgacgttcctgtcc
aacatgtcgggcctcaagcgcgagggcatcacccatgccgcgttcgaggcgtcgagccac
ggcctcgcccaatatcgcaccgaagggctgccggtggtcgccggggccttcaccaacctg
tcgcgcgatcatctcgattatcatggcgacatggacagctatttcgatgccaagatgcgg
ctgttcgacgaagtggtcgcccgcggtggggcggcagtcgtctgggcggacgacccatgg
tccgacaaggttgtcgaacgggctacgaagcgggggcttcgtctgctgagcgtcggggtg
aaggggcaggcattgcgtcttgccaaccgcaccccgacccagttgggccagacgctggaa
atcgaggcggacggcgagttctacaaggtcaacctgccgctgatcggagcctatcaggcg
gccaatgccctgacggcggcgggtcttgtcgtcgcgaccggcggcgacgtggcgaaggtg
ctggaactgctgggccgggtgcagccggtgcgcgggcggctggagcgcgccgtcatcagc
aaggcgggcgcgccggtctatgtcgattatgcccatacgcccgatggcctgcgcgccgcc
atcgaggcgttgcgcccgcatacgaagggccgcctggtcgcgctgttcggagcgggcggg
gatcgcgacgcgggtaagcggcctttgatgggcaaggtcgcgacggaactggccgaccat
gtgatcgtgacggacgacaatccgcgctccgaagatccctccgcgatccgcgccgccgtg
atggcgggcgcaccgggcgcggaggagattggcggacgccgcgccgccatcgccgccgcc
atcgcccaggccggggcggacgacatcgtgctgctggcgggcaaggggcatgagcagggc
cagatcatcggcgaccgcgtgctgcccttcgatgacgtgaccgtggcgcgggagtgcgcg
ggttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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