KEGG   Solitalea canadensis: Solca_2948
Entry
Solca_2948        CDS       T02084                                 
Name
(GenBank) DNA/RNA helicase, superfamily II
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
scn  Solitalea canadensis
Pathway
scn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:scn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Solca_2948
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scn03019]
    Solca_2948
Enzymes [BR:scn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Solca_2948
Messenger RNA biogenesis [BR:scn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Solca_2948
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UvrD-helicase AAA_22 CMS1 ERCC3_RAD25_C HEM4
Other DBs
NCBI-ProteinID: AFD07967
UniProt: H8KNG9
Position
3484351..3485673
AA seq 440 aa
MTFNELNLIDPILKALQSEGYTQPTPIQEQSIPVALKGQDLLGCAQTGTGKTAAFTIPIL
QLLHPIVRHEQGTTPIRALILTPTRELAIQIGESIAAYGKNLKLKHLVIFGGVNQLNQTV
ALSKGVDILVATPGRLLDLMNQKFIHLHKVQFFVLDEADRMLDMGFVNDVKRVIAKLPEK
RQTLFFSATMPPVIQQLADSILSKPVKVEVTPVSSTAETINQSVYMVDKGNKRALLTHLL
ENDGIGSALVFTKTKHGADRIARDLNKHKIKAEAIHGDKSQNARQRALSNFKSKDIRILV
ATDIAARGIDIDDLLHVINFDIPYEAETYVHRIGRTGRAGASGTALTFCDPEEMTYLKDI
VKLIGKSIPTVEDHPFPMTIQRYLEVQQQATDKKNDNRGSKRGFSHNKNRGGGQGHSSKK
QQHRKGQSKSTSASKGGPKR
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgacatttaacgaattaaatttaatagaccccatattaaaagccctgcaatcagaaggt
tatacacaacccacccctattcaggaacaatcaatcccagttgccctaaaaggccaggat
ttattgggttgcgcacaaaccggaaccggtaaaacagcggcctttaccattcccatttta
caattattacatccgattgttcgtcacgaacaaggaacaactccaataagagcccttatt
cttacgccaactcgtgagttagccattcaaataggagaaagcattgcagcctacgggaaa
aatctgaagcttaaacacctggttatctttggaggcgttaatcaactaaaccaaacggta
gcgctaagcaaaggagtagatattttggtagcaactccaggacgtctgcttgatctgatg
aaccaaaaattcattcatttacataaggttcaattctttgtactagatgaagccgaccgt
atgctcgatatgggctttgtgaatgatgtgaaaagggtgattgccaaattgcctgaaaaa
cgtcagacactattcttctcagctactatgcctcccgttatccaacaattggccgacagc
attttaagtaagcctgttaaggttgaagtaactccggtgtcatcaactgcagaaaccatt
aatcagtctgtttacatggttgataaaggcaataaacgcgcattattgacccatttacta
gaaaacgatggaattggttctgcattagtctttaccaaaactaaacatggcgcggatcgt
attgctcgtgacctcaacaagcacaagatcaaagccgaagctattcatggtgacaaatcg
cagaacgcacgtcaacgcgccctaagcaactttaaatcaaaagatatccggatattggta
gccacagatattgctgccagaggaattgacattgatgacctgttacatgtgatcaatttt
gatattccttacgaagcagaaacatatgtgcatcgtattggccgtacaggaagagccgga
gccagcggaacagctttaaccttttgtgatccggaggaaatgacctacctgaaagatatt
gttaaactgataggtaagtctattcctactgtggaagatcatccttttccaatgactatt
caacgttacctggaggttcaacaacaagcaaccgacaagaaaaacgataatcgaggaagt
aaaagaggattttctcataataaaaaccgcggaggaggtcagggacatagcagtaaaaaa
cagcaacaccgaaaaggtcagtcaaaatccacctcggcatctaaaggaggtccaaaaaga
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (26)   

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