KEGG   Streptomyces sp. CdTB01: AS200_19780
Entry
AS200_19780       CDS       T04240                                 
Name
(GenBank) ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
scx  Streptomyces sp. CdTB01
Pathway
scx03420  Nucleotide excision repair
scx03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:scx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AS200_19780
   03430 Mismatch repair
    AS200_19780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:scx03400]
    AS200_19780
Enzymes [BR:scx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AS200_19780
DNA repair and recombination proteins [BR:scx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AS200_19780
   MMR (mismatch excision repair)
    Other MMR factors
     AS200_19780
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 AAA_11 ResIII DEAD
Other DBs
NCBI-ProteinID: ALV34031
UniProt: A0A0U3F682
Position
complement(4460428..4462911)
AA seq 827 aa
MSSLFDDSFLADLQAPRGHEEPPPPPEDDHTPEPVPDDLFGGKFDVPPDRDSHYRDGAPR
PAIDPAALLDGLNENQRAAVVHAGTPLLIVAGAGSGKTRVLTHRIAHLLGSRNVHPGQIL
AITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAAD
SKRLMALVCRDLELDPKRYPPKSFSAKISNLKNELIDEEDFAAQATDGFEKTLAQAYAMY
QSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVRELV
GTGAHDEDVPPNEHDLPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLEQN
YRSTQTILSAANAVIERNESRRPKNLWTNAGAGARITGYVADTEHDEAQFVADEIDRLTD
AGDAKAGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANP
EDSVPLRRILNVPKRGIGERAEAMIDALSQREKISFPQALRRVDEAYGMAARSTNAVKKF
NTLMEDLRTIVDSGAGPATVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEFE
QETAEGETTAGLADFLERVALVADSDQIPDEEEDGSGVITLMTLHTAKGLEFPVVFLTGM
EDGVFPHMRALGQTKELEEERRLAYVGITRARERLYLTRSSLRSAWGQPSYNPPSRFLEE
IPAHHVDWKRTGATSPVSSGPASGVAASLSSSRSRSSASGASGFATRRTSEKPVVSLAVG
DRVTHDQFGLGTVVAVKGTGGNAEATIDFGDAKPKRLLLRYAPVEKL
NT seq 2484 nt   +upstreamnt  +downstreamnt
atgagcagcctctttgacgacagcttcctggcggacctccaggccccccgcggccacgag
gagcccccgccgccgcccgaggacgatcacacgccggagccggttccggacgatctgttc
ggcgggaagttcgacgtgccgccggaccgggactcccactaccgcgacggcgccccgcgc
ccggcgatcgacccggccgcgctcctcgacgggctgaacgagaaccagcgcgcggccgtc
gtgcacgccggcacccccctgctcatcgtggccggcgccggctccggcaagacccgtgtg
ctcacccaccgcatcgcccacctcctcggctcgcggaacgtgcaccccggccagatcctc
gcgatcaccttcaccaacaaggccgccggcgagatgaaggagcgcgtcgagcagctcgtc
ggcccgcgcgcgaacgcgatgtgggtgatgaccttccacagcgcgtgcgtgcgcatcctg
cgccgcgagagcaagaagctcggcttcacgtcctcgttctcgatctacgacgccgccgac
tccaagcgcctgatggccctggtctgccgggacctggagctcgaccccaagcgctacccg
cccaagtccttcagcgccaagatcagcaacctgaagaacgagctgatcgacgaggaggac
ttcgccgcccaggccaccgacggcttcgagaagaccctcgcccaggcctacgccatgtac
cagtcgcggctgcgcgaggccaacgccctcgacttcgacgacctgatcatgacgacggtc
aacctgctgcgtgccttcccggacgtcgccgagcactaccgccgccgcttccggcacgtc
ctggtcgacgagtaccaggacaccaaccacgcccagtacgcgctggtgcgcgagctcgtg
ggcaccggcgcgcacgacgaggacgtcccgccgaacgaacacgacctgccgcccgccgaa
ctgtgcgtcgtcggtgacgccgaccagtcgatctacgccttccgcggcgcgacgatccgc
aacatcctccagttcgaggaggactacccggacgcgacgacgatcctgctggagcagaac
taccgctccacgcagacgatcctgtccgcagccaacgcggtcatcgagcgcaacgagtcc
cgccgcccgaagaacctgtggaccaacgccggcgcgggcgcgcgcatcacgggctacgtc
gccgacaccgagcacgacgaggcgcagttcgtcgccgacgagatagaccgcctcaccgac
gcgggcgacgcgaaggccggcgacgtcgccgtcttctaccgcaccaacgcccagtcccgt
gtcttcgaagaggtcttcatccgtgtcggcctgccctacaaggtcgtcggcggcgtccgc
ttctacgagcgcaaggaggtccgggacgtcctggcctacctccgggtcctcgccaacccc
gaggactcggtgccgctgcgccgcatcctcaacgtccccaagcggggcatcggcgagcgc
gccgaggcgatgatcgacgccctctcccagcgcgagaagatcagcttcccgcaggcgctg
cgccgcgtcgacgaggcgtacggcatggccgcccggtccaccaacgccgtgaagaagttc
aacacgctgatggaggacctccgcacgatcgtcgactccggcgcgggccccgcgaccgtc
ctggaggcggtgctcgaacggaccggctatctcgccgagttgcaggcctcgaccgatccg
caggacgagacccggatcgagaacctccaggaactcgccgccgtggccctggagttcgag
caggagaccgcggagggcgagaccaccgcgggactcgccgacttcctggagcgggtggcc
ctggtcgccgactccgaccagatcccggacgaggaggaggacggctccggagtcatcacg
ctgatgaccctgcacaccgccaagggcctggagttcccggtggtcttcctcaccggcatg
gaggacggcgtcttcccgcacatgcgcgccctcggccagaccaaggagctggaggaggag
cggcggctcgcctacgtcggcatcacacgcgcgcgggagcggctgtacctgacgcggtcc
tccctgcgcagcgcctggggccagccgtcgtacaacccgccctcccgcttcctggaggag
atcccggcccaccacgtcgactggaagcgcacgggcgccacgtccccggtctcctccggg
cccgcgtccggagtggccgcctccctgtcgtcctcccgctcgcgctcctcggcgtcgggc
gcgtcgggcttcgccacgcggcggacgtccgagaagccggtggtctccctggccgtcggc
gaccgcgtcacgcacgaccagttcgggctcggcaccgtggtcgcggtcaagggcacgggc
gggaacgcggaggcgacgatcgacttcggcgacgccaagcccaagcggctgctgctgcgg
tacgcgccggtcgagaagctctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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