KEGG   Saccharophagus degradans: Sde_2010
Entry
Sde_2010          CDS       T00335                                 
Name
(GenBank) methionine synthase (B12-dependent)
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
sde  Saccharophagus degradans
Pathway
sde00270  Cysteine and methionine metabolism
sde00450  Selenocompound metabolism
sde00670  One carbon pool by folate
sde01100  Metabolic pathways
sde01110  Biosynthesis of secondary metabolites
sde01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:sde00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    Sde_2010
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    Sde_2010
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    Sde_2010
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    Sde_2010
Enzymes [BR:sde01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     Sde_2010
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding MtrH
Other DBs
NCBI-ProteinID: ABD81270
UniProt: Q21J59
Position
2530548..2534249
AA seq 1233 aa
MNPQLKQRIDSLYAALEERILILDGAMGTMIQSYKLQEADYRGERFANHHQDLGGNNDLL
ALTQPVILRDIHRAYLDAGADILETNTFNSTQISQADYDTQEIAYELNKESAAIARAVAD
EVTLETPNKPRFVAGVLGPTSRTCSISPDVNDPGARNVTYDELVTNYKEATLGLIEGGAD
IILIETIFDTLNAKAAVFAVKTVFEDIGYELPIMISGTITDASGRTLSGQTTEAFYNSLA
HAKPLSIGLNCALGAAELEPYVRELSRVSNCYVSAHPNAGLPNEFGEYDQSAKEMADVVE
KFAVKNYVNIIGGCCGTTPQHIKAIAETVSKYPARKIPDIEPQCRLAGLEPFNISKDSLF
VNVGERCNITGSARFKRLILEGDYTTAIEVALQQVTDGAQIIDINMDEGMLDAEAAMIKF
LNLLAGEPDIARVPIMVDSSKWDVIVAGLKCIQGKPIVNSISLKEGEAEFIERARLCKLY
GAAVIVMAFDEDGQADTAQRKIEICERSYKVLTEQAGFPPEDIIFDPNIFAVATGIEEHN
NYAVDFIEATRWIRQNLPYAGVSGGVSNVSFSFRGNDPVREAIHSVFLYYAIQAGMNMGI
VNAGQLAIYDDLPKELKDCVEDVILNKNDNGTEALLEIAEQYRGDGKAQASKEDLAWREL
PVEKRLEHSLVKGISAYIEADTEEARQNASKPIDVIEGPLMAGMNVVGDLFGSGKMFLPQ
VVKSARVMKQSVAYLQPFIEAEKTEGARSNGKILMATVKGDVHDIGKNIVGVVLQCNNFD
VVDLGVMVPCEKIIDTAIAENCDMIGLSGLITPSLDEMVNVAREMQSRQVNLPLLIGGAT
TSKAHTAVKIDPQFSLNQAVYVADASRAVGVASKLLSLDQRGPFIASIKEEYEAVRERRA
NRTSNKQLATYADAVNKKLQLDWNKFTPAVPAFTGTKVFENYPLEKLVEYIDWTPFFISW
DLVGKYPKIFKDEVIGEAATQLFKDAQEILKKLIDEKLIQASATIGFWRANTIGDDDINV
MDDNGKTLAELHHIRQQQIKNGADDVLMSLADFVAPQDTGLNDYIGGFVVTAGHGVDELA
KEYEAKGDDYNAIMVKALADRLAEAFAEHLHQRVRKEFWGYDQDENLANEDLIREKYQGI
RPAPGYPACPDHTEKRALFDLLDAEATTGVQLTEHYAMYPTAAVSGWYFAHPKAKYFNTG
KIAKDQVESLASRKGLSTAEMEKWLQSVLDYDI
NT seq 3702 nt   +upstreamnt  +downstreamnt
atgaatccccagctaaagcaacgtatcgactccctttatgccgccctcgaagagcgcatc
ctaattttagatggcgcaatgggcaccatgatacagagctacaaactgcaagaagcggat
tatcgcggcgagcgatttgcaaaccatcaccaggatttaggcggtaataacgacctgctc
gccctcacccagccggttattcttagagatattcaccgcgcttacttagatgcgggtgca
gatatactcgaaaccaatacctttaactccacacaaatatcgcaggccgattacgatact
caagaaatagcctacgagttaaacaaagaatctgcagctatcgctcgcgccgtagccgat
gaagtaaccctagaaacccccaataagccacgctttgttgcaggcgttttagggccaacc
agccgcacttgttccatatcgccagatgttaacgaccccggcgctcgcaatgtgacctac
gatgagctggtaaccaactataaagaagccaccctaggacttattgagggcggcgccgac
attattttaatcgaaactattttcgatacgctcaatgcgaaagccgcggtttttgccgtg
aaaactgtatttgaagacattggctatgaactgccaataatgatctcaggcacgattact
gatgcatcgggccgcaccttatctggccaaacaacagaggcgttttacaactcccttgct
cacgctaaacctttatctataggcttaaactgtgcattaggtgcagcagaattagagcct
tacgtgcgagagctttcgcgtgtttcgaactgttatgtttcagctcaccccaacgcgggc
ctacctaacgagtttggcgaatacgatcaaagcgccaaagaaatggccgatgtagtagaa
aaatttgcagttaaaaactacgtcaatattatcggtggctgctgcggtaccacgccgcaa
catattaaagctatcgccgagactgtaagcaaataccctgctcgcaaaattccagatatc
gagccccaatgcaggctcgcaggcctcgagccttttaatatctctaaagactcccttttt
gtaaacgtgggcgagcgctgtaacattaccggctcggcccgctttaaacgccttatatta
gaaggcgattacaccactgccattgaggtcgctctacagcaagttaccgacggtgcccag
ataattgatatcaacatggacgaaggcatgctagatgccgaagcggccatgattaagttc
ttaaacctgcttgcaggtgaacccgatattgcacgtgttccaattatggtggattcctcc
aagtgggatgtaattgttgccggtttaaaatgcattcaaggtaaacccattgttaactcc
attagccttaaagaaggtgaagcggagtttattgagcgcgcccgtctctgcaaactctac
ggtgcagcggttatcgttatggcgtttgacgaagatggtcaagcagacacagcgcaacgc
aaaatcgaaatttgtgaacgctcgtataaagtacttaccgaacaagctggctttccgccc
gaagacattattttcgaccccaatatttttgctgtagcaacaggtattgaagagcataac
aattacgccgtagactttattgaagccactcgctggattcgacaaaacctaccttatgcc
ggcgtatcgggtggtgtaagtaacgtgtctttctcattccgtggcaacgaccccgtacga
gaagccattcactctgtattcctttactacgcaattcaagcgggtatgaatatgggcatc
gtaaacgccgggcagctagctatttacgacgacctacccaaagaactaaaagactgtgtt
gaagacgttattcttaacaagaacgataacggtaccgaagcactcttagaaattgcagag
caataccgtggcgatggaaaagcgcaggccagcaaagaagatttggcctggcgcgaatta
cccgtagaaaaacgcttagagcactcgctagtaaaagggatttctgcctatattgaagcc
gacaccgaagaagcgagacaaaacgcgagcaagcctatcgatgtaatcgaagggccatta
atggctggcatgaacgttgttggcgacctgtttggctccggtaaaatgtttttaccgcag
gttgttaagtctgcacgtgtaatgaagcagtccgttgcctacttacagccgtttatcgaa
gccgaaaaaaccgaaggcgctcgcagcaacggtaaaatactaatggccaccgttaaaggc
gacgtacacgatattggtaaaaatattgttggcgtagtattgcagtgtaacaattttgat
gttgttgatttgggcgttatggtgccgtgcgagaaaattatcgacacagcaatagcagaa
aactgcgacatgattggcctatcaggccttattacaccatcgctagatgagatggtgaat
gtcgcgcgcgaaatgcaatctcgccaagtaaacttacctctgcttataggtggagccact
acgtctaaagcacacaccgcagttaaaattgaccctcaattttcgctaaaccaagccgtg
tatgttgcggatgcttcgcgtgcagttggtgtcgcctccaagcttctatccttagatcaa
cgcgggccttttattgcgtccataaaagaagagtacgaagccgttcgcgagcgccgagca
aatagaacaagcaacaagcagcttgctacttacgccgacgcagtcaacaaaaagctacag
ctagattggaataaatttaccccggcggtacccgcttttaccggaactaaggttttcgaa
aattatccgctcgaaaaactggttgaatatatagattggacaccattctttattagctgg
gaccttgtaggtaaatacccgaagatttttaaagatgaagttatcggcgaagcagcaact
cagctatttaaagacgcacaagaaatacttaaaaagctcatagatgaaaagcttattcaa
gctagcgcaactataggtttttggcgtgcaaatactattggtgacgacgatattaacgtt
atggacgacaacggcaaaacactagccgagttacatcatattcgtcagcaacaaattaaa
aatggagccgacgatgtgctcatgtctcttgcggactttgtagcacctcaagataccggc
cttaatgactacattggcggctttgttgtaaccgctggccacggggtagatgagctagct
aaagagtacgaagcaaaaggtgatgactacaatgcaatcatggtaaaagcgcttgcagat
agacttgcagaagcttttgcagagcatttgcatcagcgcgttcgcaaagagttttggggt
tacgaccaggacgagaacctcgcaaacgaagatcttatacgagaaaaatatcaaggcatt
cgccccgcaccaggctaccccgcatgcccagatcacacagaaaagcgcgctttgtttgac
ttactggatgcggaagcaactacaggcgttcaacttaccgagcactacgccatgtaccct
accgcagcagtttctggctggtactttgctcacccgaaggcaaagtatttcaatacgggc
aaaatagcgaaggaccaagttgaatctctagcgtcgcgcaaagggttaagcaccgcagaa
atggaaaagtggctgcagtcggtacttgattacgatatttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (58)   

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