KEGG T00335: Sde

Saccharophagus degradans: Sde_3271

Entry

Sde_3271 CDS T00335

Definition

glycosyl hydrolase (EC:3.2.1.52)

Orthology

K12373

hexosaminidase [EC:3.2.1.52]

Organism

sde Saccharophagus degradans

Pathway

sde00511	Other glycan degradation
sde00520	Amino sugar and nucleotide sugar metabolism
sde01100	Metabolic pathways
sde01110	Biosynthesis of secondary metabolites

Class

Metabolism; Carbohydrate metabolism; Amino sugar and nucleotide sugar metabolism [PATH:sde00520]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:sde00511]

SSDB

Motif

Pfam:

Glyco_hydro_20 CHB_HEX Glyco_hydro_20b CHB_HEX_C CHB_HEX_C_1 Glycohydro_20b2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(4172806..4175475)

AA seq 889 aa
MALFSKYVWQVAVAGALGTVSLLGSRLYAQTADTQQWIDGIASNMQVHYQVLLNKGDGEC
SLPSLPPSPKSPCSIVELSLSSPDKLAANDLDGNWSIYFSQTDPIYAHPAGEFTIDHING
DLHRIRPSASYQGFNVGEVKKVQFIVAGLTLTEAKIMPNYYVVAEGQDNKQALYSEARVI
ESTRIRIHPETGLEERPFAGEISRQNFKLSQADKTPYADAAFIFNENKNVNKLGFVAQDE
ALRTIIPTPTFVMDSGKNIDISAGINLQLQGVEQDAVAPALAWLQALGLKQNPAGMPFVV
SVSRASLPSRSPVGSYQLVVSPTQITIFAREPVGAFYGMQSLASVMIAGRNTLPVLTVND
SPRYPYRGMHIDVGRNFHSKQQILDVLDQMAAYKLNKLHLHLGEDEGWRLQIPSLPELTD
VGGKRCHDPQENTCLLMQLGADVSGKSERDGYYTRQDYIELVKAANARHIQLIPSFDMPG
HSRAVIKAMEARYRKFMAAGNKKAAEQYLLSDPNDKTQYKSIQFYSDNTINACMESPYKF
LGKVIDEVKAMHSEAGQPLTVYHIGADETAGAWAQSPICQAFFANNPYGVENAKQLGAYF
IERVAALLETKGIKTAGWSDGLSHTNPKNMPAKVQSYIWDVLPWGGVAEANKQANRGWDV
VLSHPDALYFDFPYEPDPKEGGYYWGSRHIDTHKVFNYMPGNLPALAEVYPSPTQTGFEI
AGTTPLKQGVQWAGIQGQLWSETIRSDNAVEYMIFPRLIALAERAWHAPSWEPPYNYEGA
TYNANSGLFSENKKSERDKAWLKFASVIGYKEFVKLDAADIHYRIPTVGAIIQDSMLHAN
LAYPGLGIEYKEAGKDWQPYNKPVQVKTPVLVRAKAATGDRKGRALPVE

NT seq 2670 nt +upstreamnt +downstreamnt
atggcgttatttagcaagtatgtatggcaagtggcagttgccggagcattaggtacggtt
agtttgctgggtagtcgtttatacgcgcaaactgcagatacacagcaatggattgatggc
atagccagcaatatgcaggtgcattatcaagtactgctaaataagggtgacggcgaatgc
agcttgccaagcttaccgcccagccccaaatcaccatgctctatagttgagctttcactc
agctcgccagataagcttgcggcaaacgacttagatggtaactggtctatttacttcagc
caaaccgatcccatttatgcgcacccagctggtgaatttacaatcgaccatataaatggc
gatttacaccgaattcgccccagcgccagctaccaaggatttaatgtgggcgaagttaaa
aaggtgcagtttattgtggcgggtttaacccttaccgaagccaaaataatgcccaactat
tatgtggtagcagaagggcaagataataaacaggcactatacagcgaagcccgtgttatc
gaatcaacacgtattcgtatacacccagaaacagggttagaggagcgaccttttgcaggc
gaaataagtaggcaaaattttaagctgtcgcaggcagataaaacgccttacgccgatgcc
gcttttatatttaacgaaaataaaaacgtaaataagctgggatttgtagcgcaagacgaa
gcgctgcgcacaataatacctacgccaacttttgtaatggactctggcaaaaatatagat
attagcgcaggtataaacctgcagctacagggggtggagcaagacgcagttgcgccggca
ctggcgtggctacaagcattgggcctaaagcaaaaccctgcgggcatgccgtttgttgtg
tctgtttcgcgggcgagcttaccgtcgcgctcgccagtggggtcctatcaattggtggta
tcgccaacgcaaattaccatctttgcccgcgaaccggttggtgcgttttacggtatgcaa
tcgttggcgagtgtaatgatagcgggcagaaatactttacctgtgttaaccgttaacgat
tcgcctcgttacccttatcgcggtatgcacatagatgtaggtcgtaactttcattccaaa
caacaaatactggatgtattagatcaaatggcggcgtacaagcttaacaagctgcatttg
catttgggtgaagatgaaggctggcgcttgcaaatacccagcttgccagaacttactgat
gtgggcggtaagcgctgtcacgatccacaagaaaacacctgcttattaatgcagcttggg
gcagacgtaagcggcaaaagtgaacgcgatggctattacactcggcaagattatatagag
ctagtaaaagctgcgaatgcgcgtcacatacagttaatcccttcttttgatatgcccggt
cattcgcgcgctgtaataaaagctatggaggcgcgttaccgtaaattcatggccgctggt
aataaaaaagccgctgaacaatatttactttcagacccaaacgataaaacgcagtacaaa
agtattcagttttattccgataacacgattaacgcgtgcatggaatctccttataaattt
ttaggcaaagtaatagacgaagtaaaagccatgcacagcgaagcgggccagccgcttacg
gtttaccatataggcgcagatgaaaccgccggtgcttgggcgcaatcgccaatatgccaa
gcgttttttgccaacaacccttacggtgtagaaaatgccaaacagctaggtgcttatttt
atcgagcgcgtggccgcattattagaaactaagggtattaaaaccgcaggttggagcgat
ggtttaagccacactaacccaaaaaatatgcccgccaaggtgcaatcgtatatttgggat
gtattaccttgggggggcgttgccgaagcaaataagcaagccaatcgagggtgggatgta
gtgctatctcacccagacgcgctgtattttgacttcccatacgagccagacccaaaagaa
ggcggctattattggggcagccgccatatagatacccacaaagtatttaactatatgccc
ggtaacttaccggctttggcagaggtatacccaagccctacccaaacagggtttgaaata
gcaggcaccaccccattaaaacaaggcgtgcaatgggcgggtatccaaggccagctgtgg
agcgaaactatacgcagcgataacgctgtggaatatatgatctttccgcgtttaattgcc
ttggcagagcgcgcatggcacgcaccaagttgggagccgccctacaattacgagggcgca
acctataatgctaatagcggtttattttctgaaaataaaaaaagtgagcgcgataaagcg
tggttaaaattcgcaagcgtcattggctacaaagaattcgttaagctagatgccgccgac
attcactaccgcataccaacggtgggcgctattattcaagactccatgctacacgcaaat
cttgcttacccagggttaggtattgaatataaagaagccggtaaagattggcagccttac
aacaagccagtacaagtaaaaacgccggtactggtgcgcgcaaaagccgcaacgggggat
agaaaggggcgtgcgttacctgttgagtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SDE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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