KEGG   Spiroplasma diminutum: SDIMI_v3c00020
Entry
SDIMI_v3c00020    CDS       T02741                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
sdi  Spiroplasma diminutum
Pathway
sdi03030  DNA replication
sdi03430  Mismatch repair
sdi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sdi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SDIMI_v3c00020 (dnaN)
   03430 Mismatch repair
    SDIMI_v3c00020 (dnaN)
   03440 Homologous recombination
    SDIMI_v3c00020 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sdi03032]
    SDIMI_v3c00020 (dnaN)
   03400 DNA repair and recombination proteins [BR:sdi03400]
    SDIMI_v3c00020 (dnaN)
Enzymes [BR:sdi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SDIMI_v3c00020 (dnaN)
DNA replication proteins [BR:sdi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SDIMI_v3c00020 (dnaN)
DNA repair and recombination proteins [BR:sdi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SDIMI_v3c00020 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_3 DNA_pol3_beta_2 MJ1010-like_2nd
Other DBs
NCBI-GeneID: 16854642
NCBI-ProteinID: AGR41706
UniProt: S5LYT7
Position
1466..2590
AA seq 374 aa
MFFSVNRLVLIDEINKCNRIIDPKIPTPSLSGILLEVEADKISLVSSNSSVSIKTVIDMG
KSDLQIKETGNILIRGKYFLEILKRMDDDIINISSVENNLVSLSGEKSEFSLNILDFSDY
PSIGFREKGDTVTVNNIDLKKSLNQTIVSVNEWNQKIVLAGLNFSLDNSMFYITGTDGFR
VSRKRTNVLNEIPEKFETNIPHKSILELIKLLPEKGECKIVSIDSHVTFIINNTIFQTTI
LEGQFPNVNAVFPTDFNTTLYMDNKKFFKLISRADIPSEDNASTVVNLILNNDSIFIKSN
IHQIGSFEEVFKEFELKGLDEQNICFNSKYLIDSLKTFETKNIEINLIDSKKPIVISSSE
DMNLSQIILPMFSN
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgtttttcagtgttaatagactagtacttattgatgaaattaataaatgtaataggatc
attgatcctaaaattcctacaccaagtttatctggaatattattagaagtagaagctgat
aaaatttctttagtttcttctaatagttctgtttcaattaaaacagtaattgatatggga
aaaagtgatttacaaattaaagaaactggaaatattttaattagaggtaaatatttttta
gaaatattaaaaagaatggacgatgatattattaatatttcaagtgttgaaaataattta
gtttctttatccggagaaaaatcagagttttcattaaatattttagattttagtgattat
cctagcattggttttagagaaaagggagatactgtaactgttaacaatattgatcttaaa
aagagtcttaatcaaacaattgtttctgtaaacgaatgaaatcaaaaaatagtattagct
ggcctaaacttttctcttgataactcaatgttttatataactggtactgatggttttaga
gtttcaagaaaaagaacaaatgttttaaatgaaattcctgaaaaatttgaaactaatatt
ccacataagagtattttagaattaataaaattacttccagaaaagggagaatgtaaaatt
gtttcaatagatagtcatgtaacgtttattattaataatacaatttttcaaacaacaatt
ttagaaggacaatttccaaatgttaatgctgtatttccaacagattttaatacaacatta
tatatggacaataaaaaattctttaaattaatatcaagagctgatattccaagtgaagat
aatgcttcaacagttgtgaatcttattttaaataatgatagtatttttattaaatcaaat
attcatcaaataggaagttttgaagaagtatttaaagaatttgaattaaagggattggat
gaacaaaatatttgttttaattcaaaatatttaattgattctttaaaaacatttgaaact
aaaaatatagaaataaatctgattgattcaaaaaaaccaatagttatttcttcatctgaa
gacatgaacttgagtcaaataattttaccgatgttttcaaattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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