KEGG   Shewanella denitrificans: Sden_0793
Entry
Sden_0793         CDS       T00344                                 
Name
(GenBank) Pseudouridine synthase, Rsu
  KO
K06183  16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Organism
sdn  Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:sdn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sdn03009]
    Sden_0793
Enzymes [BR:sdn01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.19  16S rRNA pseudouridine516 synthase
     Sden_0793
Ribosome biogenesis [BR:sdn03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    Sden_0793
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: ABE54083
UniProt: Q12R43
Position
911152..911853
AA seq 233 aa
MRLDKFVCKSTPLSRTEAVQVIHHERVLVNGVAIVDEAAQVHENNHIILDGKHLVPRPFR
YLLLHKPANCLSANISEPSKSTKYPSVFDVLNIDNSSELHLVGRLDADTTGLLLATDDGR
WSFTITSPNSDCSKVYRVGLAKPLGPEVADKFLAGILLQGEHELTLPAKLEVISPNQVLL
TLTQGKFHQVKRMFAAVGNKVVSLHREKIGAISLDVPQGQWRALTEAEVNAMG
NT seq 702 nt   +upstreamnt  +downstreamnt
atgcgcttagataaatttgtctgcaaaagtacccctttgtctcgaacagaggcggttcag
gttattcatcatgaaagagtgctggtcaacggggtggcgatagtcgatgaagcggcgcag
gtgcatgaaaataatcacattattctcgatggtaagcatcttgtccccaggccttttcgc
tacctcttactgcataaacctgccaattgcttaagcgccaatatctctgaacctagcaag
tcgacaaagtacccctcggtgttcgatgtattgaacatagataacagcagtgagctgcat
ttagttggtcgattggatgcggataccacagggctattactcgccaccgatgatggtcgc
tggtcatttactatcacaagtcccaactctgattgcagcaaagtgtaccgggttgggctt
gctaaacccctagggccagaggttgccgataagtttttagcggggatcttattgcaaggg
gaacacgagcttaccttgcccgccaaacttgaagttatttcgcctaaccaagtgttattg
actctgactcagggaaagtttcatcaagtaaaacgtatgtttgccgccgtggggaataag
gtggtgtcgctgcatagagagaaaattggcgctatcagtttggatgtgccccaagggcag
tggcgcgcactaacagaggctgaagttaacgccatgggctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system