KEGG   Sulfuricella denitrificans: SCD_n01291
Entry
SCD_n01291        CDS       T02857                                 
Name
(GenBank) uracil-DNA glycosylase superfamily
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
sdr  Sulfuricella denitrificans
Pathway
sdr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sdr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SCD_n01291
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdr03400]
    SCD_n01291
Enzymes [BR:sdr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     SCD_n01291
DNA repair and recombination proteins [BR:sdr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SCD_n01291
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: BAN35120
UniProt: S6AA25
Position
1301375..1301884
AA seq 169 aa
MLIVGLAPGMHGANRTGRPFTGDFAGILLYRTLHKYGFASAPASVSVEDGLELIDCRITN
AVKCLPPLNKPEPAEIRQCNGYLCGEIAGLGDSAAILALGTIAHQAVLRALELKLKDFSF
GHGAVHALPRGMTLYDSYHCSRYNTQTRRLTAEMFESVFANIRNNLPRS
NT seq 510 nt   +upstreamnt  +downstreamnt
ttgctgatcgtcggcctggcaccgggtatgcacggggccaaccgcaccggccggccgttt
accggggatttcgcgggtatattgctgtaccggacgctgcataagtatggtttcgccagc
gcaccggcttcggtcagcgtggaggatggactggaattgatcgactgtcgcatcaccaat
gcagtcaaatgcctgccgccgctaaacaagccggagcctgccgaaatcaggcagtgcaac
ggctatttatgtggggaaatcgcgggtcttggagatagtgctgcgatactcgcgctgggc
acgatcgcgcatcaggcggtgctgcgcgcgctggagctcaaactcaaggatttttccttc
ggccatggtgcggtgcatgcgcttccccgtggaatgaccctgtacgacagctatcattgc
agtcgctataatactcagaccagacgacttaccgcggaaatgttcgagtccgtgttcgcc
aatatccgcaacaacttgccaaggagctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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