KEGG   Streptomyces davaonensis: BN159_2199
Entry
BN159_2199        CDS       T02518                                 
Name
(GenBank) rhamnogalacturonase B
  KO
K18195  rhamnogalacturonan endolyase [EC:4.2.2.23]
Organism
sdv  Streptomyces davaonensis
Brite
KEGG Orthology (KO) [BR:sdv00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    BN159_2199
Enzymes [BR:sdv01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.23  rhamnogalacturonan endolyase
     BN159_2199
SSDB
Motif
Pfam: RhgB_N CBM-like fn3_3 CarboxypepD_reg EMC7_beta-sandw
Other DBs
NCBI-ProteinID: CCK26578
UniProt: K4QZQ7
Position
2470594..2472276
AA seq 560 aa
MTPPTPMPAPGPVGRRAFVLGAAAAAGTAALAGTASAAAFGWRDDGSNYVIDTGANLVFK
VRKSNGDLSSLVYRGVECQGYGGMNSHIESGLGSSTVTITQSGPTILVSVTYGTLRHYYA
ARSGENNIYVWTNKADTSVSATRFILRVKAGLFLNDEPDSYTYAPTAIEASDVFAKSDGQ
TRSKHYSKLRVMDYDYVGWSAGGVGLWIVRSNHEKASGGPFYRSLLRHQSADGGGLYEIL
YYGQNQTEAQRFGLQGPYVIALTDGGAPSSALFPGTLTTSWADSLGLSGYVGASGRGRVA
GVGISGRNTAYAYTVGLANSAAQYWGSARASDGWFSISGVLPGTYTLTVFKDELAVHTGS
VTVTAGAATTLNTIAIPSSNDPSNASAIWRIGDWNGTPRGFKNADLMTYAHPSDVRAAAW
TGNVVIGSGSETTAFPCYLWKDVNSGIVVYFRLTAAQAAAAHTLRIGVTTAYANGRPQVV
VNDTWTSAIPSPPTQPNTRSLTNGSYRGNNHTFTYSVPASAWLTDTGAYNTLRINVVSGS
GTTSYLSAGTSIDAIDLLSS
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgactccccccacccccatgcccgctcccggaccggtcggccgccgcgccttcgtcctc
ggcgccgcggcagcggcgggaaccgcggccctggccggcacggcctccgccgccgccttc
ggctggagagacgacggctcgaactacgtcatcgacaccggggccaacctggtcttcaag
gtccgcaagtccaacggcgacctgtcctcgctggtctaccggggcgtggagtgccagggc
tacggcggcatgaactcgcacatcgagtccggcctcggctcctccaccgtcaccatcacc
cagtccggcccgacgatcctggtctccgtcacctacggcacgctgaggcactactacgcg
gcccgcagcggcgagaacaacatctacgtgtggaccaacaaggccgacacgtccgtgtcg
gcgacccgcttcatcctgcgcgtcaaggcagggctgttcctcaacgacgagcccgattcc
tacacttacgcgcccaccgccatcgaggcctccgacgtcttcgcgaagtccgacggccag
acccgctccaagcactactccaagctgcgggtgatggactacgactacgtcggctggtcg
gccggcggtgtcgggctgtggatcgtgcgcagcaatcacgagaaggcctccggcgggccc
ttctaccgctccctcctgcgccaccagagcgcggacggcggcggcctgtacgagatcctg
tactacggacagaaccagaccgaggcccagcgcttcggcctccagggcccgtacgtcatc
gccctcaccgacggcggcgcgccctcctccgccctcttcccgggcaccctcaccacctcc
tgggcggactcgctcggcctgtcgggctacgtcggcgcgagcggccggggccgggtcgcc
ggggtcggcatcagcgggcggaacacggcgtacgcctatacggtgggcctcgccaactcg
gctgcccagtactggggttcggcgcgcgcctcggacggctggttctccatctccggagtg
ctgccggggacgtacacgctgaccgtcttcaaggacgaactcgccgtgcacaccggctcg
gtgacggtcactgcgggtgcggcgaccaccctgaacacgatcgcgatcccctcctccaac
gacccctccaacgcgagcgcgatctggcggatcggcgactggaacggcacgcccagaggg
ttcaagaacgccgatctgatgacgtacgcccatccctccgacgtccgggccgccgcctgg
acaggaaatgtggtgatcggcagcgggagcgagaccaccgccttcccctgctacctctgg
aaggacgtcaacagcgggatcgtcgtgtacttccggctcaccgccgcgcaggccgccgcc
gcgcacaccctgcgcatcggcgtgacgacggcctacgccaacggccgcccgcaggtcgtc
gtcaacgacacctggacgtccgccatcccctccccgcccacccagccgaacacccggtcg
ctgaccaacggctcctatcgcggcaacaaccacaccttcacctacagcgtcccggcgtcc
gcctggctgacggacaccggcgcctacaacaccctgcggatcaacgtggtgagcggttcg
gggacgacgtcctacctcagcgccggcacctcgatcgacgcgatcgacctgctgtcctcc
tga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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