KEGG   Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_2665
Entry
SCH_2665          CDS       T00240                                 
Symbol
rluD
Name
(GenBank) pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA)
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
sec  Salmonella enterica subsp. enterica serovar Choleraesuis
Brite
KEGG Orthology (KO) [BR:sec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sec03009]
    SCH_2665 (rluD)
Enzymes [BR:sec01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     SCH_2665 (rluD)
Ribosome biogenesis [BR:sec03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SCH_2665 (rluD)
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2 TruB_N
Other DBs
NCBI-ProteinID: AAX66571
UniProt: Q57L41
Position
complement(2822784..2823764)
AA seq 326 aa
MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILNQRVLVNGQLCDKPKEKVL
GGERVAIDAEIDEEIRFEAQDIPLDIVYEDDDILVINKPRDLVVHPGAGNPDGTVLNALL
HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQLREITREYEAVAIGHMT
AGGTVNEPISRHPTKRTHMSVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHM
AHITHPLVGDQVYGGRPRPPKGASEEFISTLRKFDRQALHATMLRLYHPVSGIEMEWHAP
IPQDMVDLIDAMRADFEDHKDDVDWL
NT seq 981 nt   +upstreamnt  +downstreamnt
atggcacaacgagtacaactcaccgcaacggtctccgaaaaccaactcggtcaacgctta
gatcaggctttggccgaaatgttcccggattattcacgttcgcgtataaaagaatggatt
ttgaatcagcgcgtgttggtcaatggtcaactttgcgataagccaaaagaaaaagtgtta
ggcggcgagcgggtggctattgatgcggagatcgacgaagagattcgttttgaagcgcag
gatatcccgttagatattgtttatgaagatgacgatattctggttatcaacaaaccacgc
gatctggtggtacatcctggcgcgggtaacccggacggtacggtactgaacgcgttgcta
cattattatccgccgattgcggatgttccgcgcgcgggcattgtgcatcgtctggataag
gacacgacggggctgatggtggtggccaaaaccgttccggcgcaaacgcgcctggtggag
tctttgcagctgcgcgagattacccgcgaatatgaagcggtcgcgatcggacatatgacg
gcgggaggaacggtgaatgaacccatcagtcgtcacccgaccaaacgtacccatatgtcg
gtgcatcccatgggcaaaccggcggtgacccactaccgcattatggaacatttccgtgtg
cacacgcgtcttaggctgcgtctggagactgggcgtacgcaccagatccgcgtgcatatg
gcgcatattacgcacccgttagtgggcgatcaggtctacggtggtcgtccacgtccaccg
aaaggcgcatcggaagagtttatttccactctgcgtaagtttgaccgccaggcgcttcat
gcaacgatgctgcgtctctaccatcctgtatcgggtatcgaaatggagtggcacgcgccg
attccacaagatatggtggaccttatcgatgcgatgcgcgccgatttcgaagatcataaa
gatgatgtggactggttatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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