KEGG   Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_4229
Entry
SCH_4229          CDS       T00240                                 
Symbol
orn
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
sec  Salmonella enterica subsp. enterica serovar Choleraesuis
Brite
KEGG Orthology (KO) [BR:sec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sec03019]
    SCH_4229 (orn)
   03009 Ribosome biogenesis [BR:sec03009]
    SCH_4229 (orn)
Messenger RNA biogenesis [BR:sec03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SCH_4229 (orn)
Ribosome biogenesis [BR:sec03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    SCH_4229 (orn)
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: AAX68135
UniProt: Q57GM7
Position
4529497..4530042
AA seq 181 aa
MSADENNLIWIDLEMTGLDPERDRIIEIATLVTDASLNILAEGPTIAVHQSDAQLALMDD
WNVRTHTGSGLVDRVKASTMGERDAELATIEFLKTWVPAGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILAGFTKQGTHQAMDDIRESVAELAYYREHFIK
L
NT seq 546 nt   +upstreamnt  +downstreamnt
atgagtgccgatgaaaacaacctgatttggatcgatctggagatgacaggtctggacccc
gagcgcgatcgcattattgagatagccacgctggtaacggatgccagcctgaatattctg
gcggaagggccgacgattgcggtacatcaatccgatgcgcaactggcgttaatggatgac
tggaacgtgcgcacccataccggcagcggcctggtagatcgcgttaaggcaagtacgatg
ggcgaacgagacgctgaactggcgacgattgaatttttgaaaacgtgggtgcctgcgggt
aagtcgccgatttgcggtaacagcatcggtcaggatcgtcgttttctgtttaaatatatg
ccggaactggaggcctacttccactatcgctatctggatgtcagtacgctcaaggagctg
gcgcgccgctggaagccggagattctggccggctttaccaagcagggcacgcaccaggcg
atggatgatattcgcgagtcggtggcggagctggcttactaccgcgagcatttcattaag
ctgtga

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Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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