KEGG   Sedimenticola thiotaurini: AAY24_08155
Entry
AAY24_08155       CDS       T03943                                 
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
seds  Sedimenticola thiotaurini
Pathway
seds03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:seds00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AAY24_08155
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:seds03019]
    AAY24_08155
   03016 Transfer RNA biogenesis [BR:seds03016]
    AAY24_08155
Enzymes [BR:seds01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     AAY24_08155
Messenger RNA biogenesis [BR:seds03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     AAY24_08155
Transfer RNA biogenesis [BR:seds03016]
 Prokaryotic type
  tRNA degradation factors
   AAY24_08155
SSDB
Motif
Pfam: RNase_PH PNPase S1 RNase_PH_C KH_1 KH_2 KhpA-B_KH
Other DBs
NCBI-ProteinID: AKH20325
UniProt: A0A0F7JZG2
Position
complement(1783498..1785594)
AA seq 698 aa
MTPTKKVFQYGEHTVSLETGEIARQADGAIMIDMDGTVVQCTVVGAKSAVEGRDFFPLTV
DYQEKTYASGRIPGGFFRREGRPSEKEILTCRLIDRPVRPLFPKGFTNEVQIICTVMSLN
PKVDPEIPSLIGVSAALAISGLPFQGPIGAARVGYKDGNYILNASSTGLSDESDLDLVVA
GTEHAVLMVESEARELSEEVMLGAVLFGHEQMQVAINAIKELAAEVGKPTIEYSVPVEDE
SLTEAVAAAAGDAIKQAYTIADKMERYAQLDAATNAAVEALCSGEDAKWSEGEVKDAIGK
LKKKIVRGRILSGEPRIDGRDTKTVRPISVRTGVLPRTHGSALFTRGETQALVVTTLGTE
RDSQIIDALDGTYREPFMLHYNFPPFCVGETGRVGSPKRREIGHGRLAKRGVLSCMPTLE
EFPYSIRVVSEITESNGSSSMASVCGTSLALMDAGVPIKAPVAGVAMGLIKEDDAFAVLT
DILGDEDHLGDMDFKVAGTSNGINALQMDIKIDGITKQIMEIALDQAKAGRLTILEEMNK
AIDTHREEMSEHAPRIITIKIDPDKIRDVIGKGGTTIRSITEETGATVDVSDDGVVKIFS
VDKAAGEDAKKRIELITADVEVGAIYEGKVVRLMDFGAFVTILPGRDGLVHISQICEERV
EKVSDKLAEGDVVKVKVLEVDKQGRVRLSMKAVEEGES
NT seq 2097 nt   +upstreamnt  +downstreamnt
gtgacccctaccaaaaaagtatttcagtacggtgaacacaccgtaagcctggagaccggc
gaaatcgcccgccaggcggacggcgcgatcatgatcgatatggacggcactgtggtgcag
tgcaccgtggtgggcgccaagagcgccgttgaaggccgggacttcttcccgctgaccgtt
gattaccaggagaaaacctacgcttccggccggattccgggtggttttttccggcgtgaa
ggtcgcccttccgagaaggagatcctgacctgtcgcctgattgaccggccggttcgcccc
ctgttcccgaagggctttacaaatgaggtacagatcatctgtaccgtgatgtcgctgaac
ccgaaagtggatccggagattccgtcactgatcggcgtctccgcggcactggccatctcc
ggtctgccgttccagggaccgattggtgcggcccgagtgggttacaaggatggcaactac
atccttaacgcttccagtaccggactcagcgacgagagcgatctggacctggtggttgcg
ggtaccgagcatgcggtgctgatggttgaatccgaggcacgtgaactctccgaggaggtg
atgctgggtgcggtactgttcggtcacgaacagatgcaggtcgccatcaacgccatcaag
gagctggccgctgaagtcggtaagccgaccatcgagtacagtgtcccggttgaagacgag
tcgctcaccgaggcggtggctgccgccgccggcgatgcgatcaagcaggcctacacgata
gctgacaagatggagcgttacgcccagctggacgcggccaccaatgccgctgtcgaagcg
ctctgctccggtgaagatgccaagtggagcgagggtgaggtgaaagatgccatcggtaaa
ctgaagaagaagatcgtccgtggacggattctctccggtgagccccgtatcgatggtcgt
gacaccaagaccgtacgtcccatcagcgtgcgtaccggggtattgccccgtacccatggc
tccgccctgttcacccgtggcgagacccaggcgctggtggtgaccacgttgggtaccgag
cgtgattcccagattatcgatgcactggatggcacgtatcgtgagccgttcatgctgcac
tacaacttccctcccttctgcgtgggcgagaccggtcgtgtcggttcacccaaacggcgt
gagatcggtcacggtcgtctggccaagcgcggcgtgctctcctgtatgccgaccctggag
gagttcccctattcgatccgtgtggtctctgagattaccgagtcgaacggctccagctcc
atggcttcggtctgcggtaccagcctggcactgatggatgccggtgtgccgatcaaggcg
ccggtagccggtgtggccatgggcctgatcaaagaggatgacgcctttgccgtgttgacc
gatatcctgggtgacgaagatcacctgggtgatatggacttcaaggtggccggtacctcc
aacggtatcaacgccctgcagatggatatcaagatcgacgggatcaccaagcagatcatg
gagatcgctctggatcaggccaaggcaggacgcctgaccatcctggaagagatgaacaag
gcgatcgatacccatcgggaagagatgtccgagcatgcgccgcgcatcatcaccatcaag
atcgacccggacaagattcgtgacgtaatcggcaagggtggcaccaccatccgttccatc
accgaagagaccggtgccacggttgacgtcagcgatgacggtgtggtgaagatcttctcg
gtcgacaaggccgccggtgaagatgccaagaaacgtatcgaactgatcaccgctgatgtg
gaagtgggtgcgatctacgaaggtaaggtggtccgtctgatggacttcggcgcctttgtc
accatcctgccgggccgggatggcctggtgcacatctcccagatctgtgaagagcgggtc
gagaaagtgagcgacaagctggccgaaggtgatgtggtcaaggtgaaagtcctggaggtg
gacaagcagggtcgtgtccgtctcagcatgaaagctgtggaagagggcgagtcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (32)   

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