KEGG   Salmonella enterica subsp. enterica serovar Newport SL254: SNSL254_A4195
Entry
SNSL254_A4195     CDS       T00739                                 
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
see  Salmonella enterica subsp. enterica serovar Newport SL254
Pathway
see03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:see00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SNSL254_A4195 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:see03019]
    SNSL254_A4195 (rhlB)
Enzymes [BR:see01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SNSL254_A4195 (rhlB)
Messenger RNA biogenesis [BR:see03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SNSL254_A4195 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CCDC138_C ERCC3_RAD25_C AAA_22
Other DBs
NCBI-ProteinID: ACF64275
UniProt: B4SZ26
Position
complement(4089737..4091002)
AA seq 421 aa
MSKTHLTEQKFSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPAAQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIESYIGHSIPVSKYNPEALMNDLPKPLRLTRSRPGNGPRRAGAPRNRRRS
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccacaggtg
gttgaagcccttgaaaaaaaagggttttataattgtacgcccattcaggcactggccctt
ccgctaacgctggcgggtcgtgacgttgcagggcaggcgcaaaccggtaccgggaaaacg
atggcgtttctgacgtcaacgtttcattatttactttctcatcccgcgatcgacgatcgc
aaggtgaaccagccgcgcgcgctgatcatggcgccgacgcgtgaattagccgtacaaatt
cacgcagacgcggagccgttggcgcaagcgacaggcttaaaattaggcttggcttacggc
ggcgatggttacgacaagcagcttaaagtgctggaaagcggcgttgatattcttattggt
acgacgggccgactgatcgactacgccaaacaaaatcacattaacctcggcgccattcag
gtcgtcgtactcgatgaagccgatcgcatgtacgatttgggctttattaaagatatccgc
tggctgttccgtcgtatgccgccggctgcgcagcgtctgaacatgttgttctccgccacc
ctgtcttatcgggttcgcgagctggcgtttgaacagatgaacaacgccgaatatgttgaa
gtggaaccggagcaaaagaccggccaccgcattaaagaagagcttttctacccctctaat
gaagagaaaatgcgtttactgcaaacgctgatcgaagaagagtggccggatcgcgccatt
attttcgccaacaccaagcatcgttgcgaagatatctggggacatctggcggcagatggc
catcgtgttggtctgctgaccggcgacgtcgcgcagaaaaagcgcctgcggattctggat
gagttcacccgcggcgatctggatattcttgtggcgaccgatgtcgcggcgcgcgggttg
catatccccgccgtaacgcacgtctttaactacgatctgccagacgattgtgaagactat
gttcaccgtatcggtcgtaccggtcgcgctggcgccagcgggcattccatcagcctggct
tgcgaagagtatgcgctgaatctgcccgccattgagagctatatcggccactcgattccg
gtcagcaaatacaatccggaagcgctcatgaacgatctacccaagccgttgcgcctgacg
cgttcgcgtcctggcaatggtccgcgtcgtgctggcgctccgcgtaatcgtcgtcgttca
ggttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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