KEGG T01782: UMN798

Salmonella enterica subsp. enterica serovar Typhimurium 798: UMN798_3822

Entry

UMN798_3822       CDS       T01782

Name

(GenBank) hypothetical protein

K14415

tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]

Organism

sef Salmonella enterica subsp. enterica serovar Typhimurium 798

Brite

KEGG Orthology (KO) [BR:sef00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sef03016]
    UMN798_3822
Enzymes [BR:sef01000]
6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     UMN798_3822
Transfer RNA biogenesis [BR:sef03016]
Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    UMN798_3822
Prokaryotic type
   tRNA splicing ligases
    UMN798_3822

SSDB

Motif

Pfam:

RtcB DUF4514

Other DBs

NCBI-ProteinID:

AFD60384

Position

complement(3701714..3702931)

AA seq 405 aa
MMNYELMTTQNAPVKMWTKGVPVEDDARQQLINTAKMPFIFKHIAVMPDVHLGKGSTIGS
VIPTKGAIIPAAVGVDIGCGMNALRTSLTAADLPENLADLRSAIEAAVPHGRTTGRGHRD
VGAWGNPPANVNEKWAQLEAGYQWLTQKYPRFLNTNNYKHLGTLGTGNHFIEICLDETDR
VWIMLHSGSRGIGNAIGTYFIGLAQQEMQEQLETLPSRDLAYFNEGSEYFDDYLKAVHWA
QQFASLNREAMMENALAALQRCVEKPIALDMDEINCHHNYVQKEQHFGEEIYVTRKGAVS
ARRGEFGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRVMSRTKAKKLFSVDDQIRATAH
VECRKDADVIDEIPMAYKDIDAVMAAQSDLVEIMYALRQVVCVKG

NT seq 1218 nt +upstreamnt +downstreamnt
atgatgaattacgaattaatgaccacccagaacgcaccggtaaaaatgtggaccaaaggc
gtaccggtagaagacgatgcccgtcagcagctgatcaatacggcgaaaatgccgtttatt
ttcaaacatattgccgttatgccggatgtgcatttggggaaaggatcgaccatcggtagc
gtgatcccgacgaaaggggcgattattccggcggcggtgggcgtggatatcggttgtgga
atgaacgcgctgcgtaccagcttaacggcggccgatctgccggaaaatctggcggatctg
cgtagcgccatagaggccgctgtgcctcacgggcgtaccaccggacgcgggcatcgcgat
gtgggcgcatggggaaacccgcccgccaacgttaatgaaaaatgggcgcaactggaagcg
ggatatcagtggttaacgcaaaaatatccgcgctttttgaataccaataactataagcac
ctgggaacgttgggaaccggtaaccactttattgagatctgtctggatgaaaccgatcgg
gtatggatcatgctgcactccggttcgcgcgggatcggtaacgccatcggcacctatttt
atcggcctggcgcagcaagaaatgcaggagcagttagaaacgctgccgtcccgcgatctg
gcgtattttaatgaaggaagcgaatattttgacgattacctgaaagcggtacactgggca
caacaattcgccagcctgaaccgcgaggcgatgatggaaaacgcgctggcggcgctccag
cgctgcgtggaaaaaccgatcgccctcgatatggacgagatcaactgccaccataactat
gtgcaaaaagagcagcactttggcgaagagatctatgtgacgcgtaaaggggctgtttcg
gcgcggcgcggtgagttcggtatcattcccggttcgatgggggcgaaaagctttatcgtg
cgcgggctgggtaacgaagagtcgttctgttcgtgcagccacggcgccggacgtgtgatg
agccgaacgaaagcgaagaaactgtttagcgttgacgatcaaattcgtgccaccgcgcat
gtcgaatgccgtaaagatgcggacgtgatcgacgagatcccaatggcgtataaagatatt
gatgcggtgatggcggcgcagtccgacctggttgaaatcatgtacgccctgcggcaggtg
gtgtgcgttaaaggatag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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