KEGG   Salmonella enterica subsp. enterica serovar Heidelberg SL476: SeHA_C0947
Entry
SeHA_C0947        CDS       T00738                                 
Name
(GenBank) putative ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
seh  Salmonella enterica subsp. enterica serovar Heidelberg SL476
Pathway
seh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:seh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SeHA_C0947
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:seh03019]
    SeHA_C0947
Enzymes [BR:seh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SeHA_C0947
Messenger RNA biogenesis [BR:seh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SeHA_C0947
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UTP25 UvrD-helicase P-loop_SecA
Other DBs
NCBI-ProteinID: ACF69639
UniProt: A0A6C6ZR07
Position
935024..936385
AA seq 453 aa
MSFDSLGLNPDILRAIAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QHLITHQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDDIKALAEKLLRNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
EKLLKKEIPRITTPGYEPDPSIKAEPIQNGRQQRGGGGRGRGQNQGGAGRSQQPRRQDSG
AAKAKPKPRTGEGKPAGDKARPPRRPRRITPAQ
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgtcttttgattccctgggattaaaccctgatatcctgcgcgccattgccgagcagggt
taccgtgaacctacccctattcagcaacaggcgattcccgccgtgctggaaggccgcgat
ctgatggccagcgcccagaccggaaccggtaaaacggcgggttttaccctgccattgttg
cagcatctgattacccatcagccgcatgctaaaggtcgtcgcccggtgcgcgcgttgatc
ctcacgccaacccgcgagctggcggcgcaaattggcgaaaacgtcagagattacagtaaa
tatctcaatattcgctcgctggtggtatttggcggcgtaagcatcaatccgcagatgatg
aaactgcgcggcggcgtggatgtgctggtggcgacgccgggacgtctgctcgacctggaa
catcaaaatgccgtgaagctggatcagattgagattctggtactggatgaagccgaccgt
atgctggatatgggcttcattcacgacattcgtcgcgtgctggcgaaactgccggcgaag
cgtcagaatctgctgttctccgccacgttctccgacgacatcaaagcgctcgccgaaaag
ctgttgcgcaatccgctggaaatcgaagtggcgcgccgcaacacggcctcagagcaggtg
acgcagcacgtgcactttgtcgataaaaaacgtaagcgcgaactgctgtcacaaatgatt
ggccagggcaactggcagcaggtgttggtcttcacccgcaccaagcatggcgcgaaccat
ctggcggaacagcttaataaagacggtattcgcagcgcggcgatccacggtaataaatcg
cagggcgcacgtacccgcgcgctggccgattttaaatccggcgatattcgcgtgctggtg
gcgacggatattgcggcgcgtggtctggatattgaagagctgccgcacgtggtcaactat
gagctgccgaacgtgccggaagattatgtacaccgtattggccgtaccggtcgcgcggcg
gcaactggcgaggcgctgtcgctggtctgtgttgacgagcataaactgttgcgtgatatc
gaaaaattgctgaaaaaagagatcccacgcattacgacgccgggctatgagccggacccg
tcgattaaagcggagccgattcagaacggtcgtcagcagcgcggcggcggcggtcgtgga
cgcggacaaaatcaggggggagcggggcgcagtcagcagccgcgacgtcaggatagcggg
gcggcgaaggcgaaaccaaaaccgcgcacaggcgaggggaaacccgctggcgacaaagca
cgtccgccgcgtcgcccgcgcagaatcacgcctgcccagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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