KEGG T00756: SSPA3706

Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601: SSPA3706

Entry

SSPA3706          CDS       T00756

Name

(GenBank) DNA-directed RNA polymerase, beta-subunit

K03043

DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]

Organism

sek Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601

Pathway

sek03020

RNA polymerase

Brite

KEGG Orthology (KO) [BR:sek00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SSPA3706
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sek03021]
    SSPA3706
   03400 DNA repair and recombination proteins [BR:sek03400]
    SSPA3706
Enzymes [BR:sek01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SSPA3706
Transcription machinery [BR:sek03021]
Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SSPA3706
DNA repair and recombination proteins [BR:sek03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SSPA3706

SSDB

Motif

Pfam:

RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 SPG4

Other DBs

NCBI-ProteinID:

CAR61989

UniProt:

B5BJQ3

Position

4135220..4139248

AA seq 1342 aa
MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVVFEIRDNKLQME
LIPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIAGKVVSKD
YVDESTGELICAANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETVRVDPTNDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKDDIIDVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRRVVDGVVT
DEIHYLSAIEEGNYVIAQANSNLDDEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFSRIRAVLVSGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKIN
PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK
LREFIQRAYDLGADVRQKVDLSTFSDDEVLRLAENLRKGMPIATPVFDGAKEAEIKELLK
LGDLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE

NT seq 4029 nt +upstreamnt +downstreamnt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttctggatgtaccttatctcctttctatccagcttgactcgtttcagaagtttatcgag
caagatcctgaagggcagtacggcctggaagcagccttccgttccgtgttcccgattcag
agctacagcggtaattccgagctgcagtacgtcagctaccgccttggcgaaccggtgttt
gacgttcaggaatgtcagatccgtggcgtgacctattccgcaccgctgcgcgtaaaactg
cgtctggtgatctacgagcgcgaagcgccggaaggcaccgttaaagacattaaagaacaa
gaagtctacatgggcgaaattccgctcatgaccgacaacggtacctttgttatcaacggt
actgagcgtgttatcgtttctcagctgcaccgtagtccgggcgtcttctttgactccgac
aaaggtaaaactcactcttcgggtaaagtgctgtataacgcgcgcatcattccttaccgt
ggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtgcgtatcgaccgt
cgccgtaaactgcctgcgaccatcatcctgcgtgcgctgaactacaccactgagcagatc
cttgacctgttctttgagaaagtcgtcttcgaaattcgcgacaacaagctgcagatggag
ctgattccagaacgtctgcgcggcgaaaccgcgtcgttcgatatcgaagctaacggcaag
gtgtacgttgaaaaaggccgtcgcattaccgcgcgtcatatccgtcagctggaaaaagac
gatatcaagcatatcgaagttccggttgagtacatcgcaggtaaagtcgtctctaaagac
tacgttgacgaatctactggcgagctgatctgcgcggcgaacatggagctgagcctggat
ctgctggctaagctgagccagtccggccacaagcgtatcgaaacgctgtttaccaacgat
ctggaccacggcccgtacatttctgaaacggtacgcgtcgatccaactaacgatcgtctg
agcgcgctggtagaaatctaccgcatgatgcgccctggtgagccgccgacacgcgaagcg
gctgaaagcctgtttgagaacctgttcttctccgaagaccgctatgacctgtctgcggtg
ggtcgtatgaagttcaaccgttctctgctgcgcgacgaaatcgaaggttccggtatcctg
agcaaagacgacatcattgatgtcatgaagaagctcatcgatatccgtaacggtaaaggc
gaagtggatgatatcgaccacctcggcaaccgtcgtatccgttccgtcggcgaaatggcg
gaaaaccagttccgcgttggcctggtgcgtgtagagcgtgcggtgaaagagcgtctgtct
ctgggcgatctggataccctgatgcctcaggatatgatcaacgccaagccgatttccgcc
gcagtgaaagagttctttggttccagccagctgtctcagtttatggaccagaacaacccg
ctgtctgagattacgcacaaacgtcgtatctccgcactcggcccaggcggtctgacccgc
gaacgcgcaggcttcgaagttcgagacgtacacccgacgcactacggtcgcgtatgtcct
atcgaaacgccggaaggtccgaacatcggtctgatcaactccctgtccgtgtacgcacag
actaacgaatatggcttccttgagacgccgtaccgtcgtgtggttgatggcgtggttact
gacgaaattcattacctgtctgctatcgaagaaggcaactacgttatcgctcaggcgaac
tccaacctggatgacgaaggccactttgtagaagatctggtgacctgccgtagcaaaggc
gaatccagcttgttcagccgcgaccaggttgactacatggacgtttccacccagcaggtg
gtctccgtcggtgcgtccctgatcccgttcctggaacacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggcggttccgactctgcgtgctgataagccgctggtg
ggtaccggtatggaacgtgctgtcgccgtcgactccggtgttactgcagtagctaaacgt
ggcggtactgttcagtacgtggatgcatcccgtatcgttatcaaagttaacgaagacgag
atgtacccgggtgaagcaggtatcgacatctataacctgaccaaatacacccgctctaac
cagaacacctgtatcaaccagatgccatgtgtgtctctgggcgagccggttgaacgcggc
gacgtgctggcagacggtccgtccaccgacctcggtgaactggcgctcggtcagaacatg
cgcgtggcgttcatgccgtggaacggctacaacttcgaagactccatcctcgtttccgag
cgtgttgtccaggaagaccgtttcaccaccatccacattcaggaactggcgtgcgtgtcc
cgtgacaccaagctggggccggaagagatcaccgctgacatcccgaacgtgggtgaagct
gcgctctccaaactggatgaatccggtatcgtttacatcggcgcggaagtgactggcggc
gacattctggtcggtaaggtaacgccgaaaggtgaaacccagctgacgccggaagagaaa
ctgctgcgtgcgatcttcggtgagaaagcgtctgacgttaaagactcttctctgcgcgta
cctaacggtgtctccggtacggttatcgacgttcaggtctttactcgcgatggcgtagaa
aaagacaaacgtgctctggaaatcgaagagatgcagctcaagcaggcgaaaaaagacctg
tctgaagaactgcagatcctcgaagcgggcctgtttagccgtatccgtgcggtgttggtg
tccggcggcgttgaagctgagaagctcgacaaactgccgcgcgaccgctggctggaactc
ggtctgaccgacgaagagaaacaaaatcagctggaacaactggctgagcagtatgacgaa
ctgaaacacgagttcgagaaaaaacttgaagcgaagcgccgtaaaatcacccagggcgac
gatctggcgccgggcgtgctgaagatcgtgaaggtctatctggccgttaaacgccgtatc
cagccgggtgataagatggcaggtcgtcacggtaacaagggtgttatctctaagatcaac
ccgatcgaagacatgccttacgatgaaaacggcacgccggtagacatcgtactgaacccg
ctgggcgtaccgtctcgtatgaacatcggtcagattctggaaacccacctgggtatggct
gcgaaaggtattggcgacaagattaacgccatgctgaaacagcagcaggaagtcgcgaaa
ctgcgcgaattcatccagcgtgcttacgatctgggcgccgacgttcgtcagaaagtcgac
ctgagcaccttcagcgatgatgaagtgctgcgtctggcagaaaacctgcgcaaaggtatg
ccgattgccacaccagtgttcgacggtgcgaaagaagcggaaatcaaagagctgctgaaa
ctgggcgacctgccgacctccggtcagatcaccttgttcgatggccgtacgggtgaacag
ttcgaacgtccggtaaccgtcggttacatgtacatgctgaaactgaaccacctggttgat
gacaagatgcatgcgcgttctaccggttcttacagcctggttactcagcagccgctgggt
ggtaaggcgcagttcggtggtcagcgcttcggggagatggaagtgtgggcgctggaagct
tacggcgccgcctacaccctgcaggaaatgctcaccgttaagtctgatgacgtgaacggt
cgtaccaagatgtataagaacatcgtggacggcaaccatcagatggaaccgggtatgccg
gaatccttcaacgttctgttgaaagagatccgctcgctgggcatcaacatcgaactggaa
gacgagtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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