KEGG   Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C37190
Entry
STMDT12_C37190    CDS       T01742                                 
Name
(GenBank) xylose operon regulatory protein
  KO
K02529  LacI family transcriptional regulator, galactose operon repressor
Organism
sem  Salmonella enterica subsp. enterica serovar Typhimurium T000240
Brite
KEGG Orthology (KO) [BR:sem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sem03000]
    STMDT12_C37190
Transcription factors [BR:sem03000]
 Prokaryotic type
  Helix-turn-helix
   LacI family
    STMDT12_C37190
SSDB
Motif
Pfam: Peripla_BP_3 HTH_AraC HTH_18 Peripla_BP_4 HdcB Abhydrolase_6
Other DBs
NCBI-ProteinID: BAJ38662
NITE: STMDT12_C37190
Position
3871048..3872226
AA seq 392 aa
MFDKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDNIKEWLGDGV
IADYDDDDIAQLLADVDVPIVGVGGSYHLAENYPAVHYIATDNHALVESAFLHLKEKGVN
RFAFYGLPNSSRKHWAAEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT
LPPQTGIIAVTDARARHVLQACEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR
QMGYQAAKLLHRLLAREEMPLQRILVPPVRVIARRSTDYRSLTDPAVIQAMHFIRNHACK
GIKVEQVLDAVGISRSNLEKRFKEEVGETIHALIHAEKLEKARSLLISTTLAINEISQMC
GYPSLQYFYSVFKKEYVTTPKEYRDQHSEALL
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgtttgataaacgtcaccgtatcactctgttatttaacgcgaataaagcctatgaccgt
caggtagtggagggggtgggtgaatatttacaagcctcgcaatccgaatgggatatattt
attgaggaagatttccgtgcccgtatcgataacattaaagagtggttaggcgacggcgtt
attgccgattacgatgatgacgatatcgcgcaattattggccgatgtcgacgtacccatt
gtcggggtcggcggttcttaccatcttgctgaaaattatcctgccgttcattacatcgcc
accgataatcatgcgctcgttgaaagcgctttcctgcatttaaaagaaaaaggcgttaac
cgcttcgcgttttacggtttgcccaactccagccgcaaacattgggcggcggaacgggaa
tacgcctttcgccagctggtcgccgaggaaaaataccgcggcgtagtctatcaggggctg
gaaaccgcgccggaaaactggcagcacgcgcaaaatcgcctcgccgactggcttcagacg
ctgccgccgcaaaccggcatcattgccgtaacggatgcccgcgcccgtcacgtattgcag
gcctgcgaacacctgcatattccggtgccggaaaaactttgcgttatcggtattgataac
gaagagttaacccgttacctgtcgcgcgtcgcgctttcctccgtcgcgcagggggcgcgg
caaatgggctatcaggcggcgaagctgctgcaccgtttgctggcgcgtgaagagatgcct
ttacagcgcattctggtgccgccggtgcgcgtcattgcgcgccgctcgacagactatcgc
tccctgaccgatccggcggttatccaggcgatgcactttattcgtaaccatgcctgtaag
ggcattaaagtcgagcaggtgctggacgcggttgggatttcacgttcaaacctggaaaaa
cgttttaaggaagaagttggcgagacgatacatgcgctgatccacgccgaaaagctggaa
aaagcgcgtagtttgttgatttctaccacgttggcgataaacgaaatttcgcaaatgtgc
ggctacccgtcgctgcaatatttctattcggtgtttaaaaaggagtacgtcactacgccg
aaggagtatcgcgaccagcatagtgaagcgttgttgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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