KEGG   Salmonella enterica subsp. enterica serovar Thompson: IA1_02270
Entry
IA1_02270         CDS       T02868                                 
Name
(GenBank) tRNA s(4)U8 sulfurtransferase
  KO
K03151  tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
Organism
sene  Salmonella enterica subsp. enterica serovar Thompson
Pathway
sene00730  Thiamine metabolism
sene01100  Metabolic pathways
sene01240  Biosynthesis of cofactors
sene04122  Sulfur relay system
Module
sene_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:sene00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    IA1_02270
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    IA1_02270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sene03016]
    IA1_02270
Enzymes [BR:sene01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.4  tRNA uracil 4-sulfurtransferase
     IA1_02270
Transfer RNA biogenesis [BR:sene03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    IA1_02270
SSDB
Motif
Pfam: ThiI THUMP QueC Diphthami_syn_2 Rhodanese tRNA_Me_trans
Other DBs
NCBI-ProteinID: AGX09691
Position
501259..502707
AA seq 482 aa
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDNIEVRAKDENQR
LAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALAQYREQLEGKTFCVRVKRRGKHEFS
SIEVERYVGGGLNQHIESARVKLTNPDVTVHLEVEDDRLLLIKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AINFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISYDKEHIINLARQIGTEDFARTMPEYCGVISKSPTVKAIKAKI
EAEEENFDFSILDKVVEEANNVDIREIAQQTQQEVVEVETVSGFGPNDVILDIRSVDEQD
DKPLKVEGVDVVSLPFYKLSTKFGDLDQSKTWLLWCERGVMSRLQALYLREQGFENVKVY
RP
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgaagtttatcattaaattgttcccggaaatcactatcaaaagccaatctgtgcgtttg
cgctttataaaaattttaaccgggaacatccgtaacgttttaaagcactacgatgagacc
ctcgcggttgtccgtcactgggataacattgaagttcgcgccaaagatgaaaaccagcgt
ctggcgattcgcgacgcgctgacccgcattccggggattcaccatattcttgaagtcgaa
gatgtgccgttcaccgatatgcacgacattttcgagaaagcgttggcgcagtatcgcgag
cagcttgaaggcaaaaccttctgcgtgcgcgtaaaacgtcgcggtaagcatgagtttagc
tccattgaggtggagcgctatgtcggcggcggattaaatcagcatattgaatcggcgcgc
gtgaagctcactaacccggatgtgacggtgcatctggaagtggaagatgatcgcctgctg
ctgatcaaagggcgttatgaaggtattggcggtttcccgattggcacccaggaagacgtg
ctgtcgctgatctccggcggttttgactccggcgtctccagctatatgctgatgcgtcgc
ggctgtcgcgtacactactgcttctttaacctcggcggcgcggcgcatgaaatcggcgtt
cgccaggtggcgcattacctgtggaaccgctttggcagctcccatcgcgtgcgttttgtg
gcgattaacttcgaaccggtggtcggcgagattctggagaaagttgacgacggccagatg
ggcgtggtgctcaaacgtatgatggtacgcgcggcgtcgaaagtggcggaacgttacggc
gtacaggcgctggtgaccggcgaagcgctgggccaggtgtccagccagacgctaaccaac
ttgcgcttgatcgataacgtgtctgacacgctgatcctgcgcccgctgatctcttacgat
aaagagcacattatcaacctggcgcgccagattggtacggaagattttgcccgtacgatg
ccggaatactgtggcgtgatttcaaaaagtccgacggtgaaagccattaaagcgaaaatt
gaagccgaagaagaaaacttcgacttcagtattctcgataaggtggtagaagaagcgaac
aacgtcgatattcgtgaaatcgcccagcagacccagcaggaggtggtggaagtagaaacc
gtgagcggtttcggcccgaacgacgtgattctggatatccgttctgtggatgaacaggat
gacaagccgctgaaagtggaaggtgtggacgtcgtttcgctgccgttctacaagctgagt
actaaatttggcgatctcgatcagagcaaaacctggctgctgtggtgtgagcgcggggta
atgagccgcctgcaggcgctctatctgcgcgagcagggctttgaaaacgtgaaagtgtat
cgtccgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

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