KEGG   Salmonella enterica subsp. enterica serovar Javiana: CFSAN001992_02980
Entry
CFSAN001992_02980 CDS       T02479                                 
Name
(GenBank) RNase II stability modulator
  KO
K14051  c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
Organism
senj  Salmonella enterica subsp. enterica serovar Javiana
Pathway
senj02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:senj00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CFSAN001992_02980
Enzymes [BR:senj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.52  cyclic-guanylate-specific phosphodiesterase
     CFSAN001992_02980
SSDB
Motif
Pfam: EAL GGDEF PAS_9 PAS PAS_4 PAS_8 GGDEF_2 PAS_10
Other DBs
NCBI-ProteinID: AGF80920
Position
complement(554262..556244)
AA seq 660 aa
MMKQIQEQTALSPLHSHWRLADNRNVLYLSPTGETDTEKTVELSPEQAGRIREITAITSS
LLITLLIEKQVTVVHLVGRKINNREWAGSLATWPDTPAVAPTQAQELSFAEQIVSEANSV
IAILDSQGKICRFNQSCEEYTGLKERDVIGQSVFKLFMSRREAVASRHYIENFFRNGNAY
EIERWIKTRKGQRLFLFRNKFVHNGSGKNEIFLICAGTDITEERRAQERLRILANTDTVT
GLPNRNAIHEFINHAIASAGESQVGIVYLDLDNFKKINDAYGHMFGDQLLQAVSLALLSC
LEEDQLLARLGGDEFIVLAAHTSQAALEAVASRILTRLRQPFRIGLIEVYTGCAIGISLA
PRHGQDSESLIRTADTAMYNAKEGGRGQFCVFSPEMNQRVFDYHWLDTNLRKALENDQLL
IHYQPKITWRGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVILDVVRQI
AKWRDKGINLRVAVNFSARQLADQTLFTALKQALYDLNFEYCPIDVELTESCLIENDTLA
LSVIQQFSQLGAQIHLDDFGTGYSSLSQLARFPIDAVKLDQAFVRDIHKQPLSKSLVRAI
VAVAQALNLQVIAEGVENAKEDAFLTKNGVNERQGFLFAKPMPAVSFERWYKRYQTKKMR
NT seq 1983 nt   +upstreamnt  +downstreamnt
atgatgaaacagattcaggaacaaacggcgctaagtccccttcactctcactggcgtctg
gctgataaccgcaacgtgctgtatctctccccgacaggtgaaacggatacagaaaaaacg
gtcgagctatcgccggagcaagccgggcgtatccgggaaataacggcgattacgtccagt
ctgctgataacgttgttgatagaaaaacaggttaccgtagtacacctggtaggccgtaag
attaataaccgtgaatgggctggcagcctggcaacctggcctgatacgcctgccgtcgcg
ccaacgcaggcgcaggagctctcttttgccgagcaaatcgtatcagaagccaactcagtc
attgcgatactggatagtcagggaaaaatctgtcgatttaatcagtcatgcgaagagtac
acgggcttaaaagagcgagatgtaattggtcaaagcgtctttaaattatttatgagtcgc
cgggaggcggttgcctcccggcactacattgagaatttttttcgcaatggcaatgcctat
gaaatcgaacgctggataaagacccgtaaaggccaacgcctgttcttatttcgtaataaa
ttcgtccataacggcagcggaaaaaacgaaattttcctgatctgcgcaggcacggatatc
accgaagaaaggcgggctcaggagcgtttacgcatactggcgaatacagacaccgtcacc
ggcctgcccaatcgcaatgctattcatgaatttattaatcatgctattgcctcggctggc
gagtcgcaggtgggtatcgtttatctcgatctggataacttcaagaaaattaatgacgcc
tatgggcatatgtttggcgatcagctcttacaggccgtttcgctggcgctgttgagttgt
ctggaggaagatcaattgctggccagactggggggagatgaattcattgtcctcgctgcc
catacgtctcaggccgcgctggaagcagtagcctcacgaatccttacccgtctgcggcaa
ccgtttcgtattggactcattgaagtttacacgggatgcgccattggcatttcgttggcc
ccccggcacggacaggacagcgaaagtctcattcgcactgccgacaccgcaatgtataac
gccaaagaaggcggccgcggtcagttctgcgttttttcgccggaaatgaatcagcgcgta
tttgactatcactggctggatacaaacctacgaaaagcgctggaaaacgaccagttactt
attcactatcagcccaaaattacctggcgcggcgaagtacgtagcctggaagcgctggta
cgctggcaatcgccggaacgcggattaattccgccgctggagttcatctcatacgccgaa
gagtcaggactcatcgtcccgctgggccgctgggtgattctggatgtggttcgccagatt
gcgaaatggcgcgataaagggattaacttgcgcgtagccgttaacttttcggcgcgacaa
ctggccgaccagacgctttttactgcgcttaaacaggctttgtacgatctgaattttgag
tattgcccgatcgatgtcgagctaacggaaagctgcctgatcgaaaacgacacgctggcg
ttatcggttatccagcaatttagtcagctcggcgcccagattcatctggatgattttggc
accgggtattcttcgctttctcaactcgcccggttccctattgatgccgttaaactggat
caggctttcgtcagagatatccataaacaaccgctgtcgaaatctctggttagggcgatt
gtcgcggtggctcaggcgctaaatttacaagtgattgccgaaggtgtagaaaatgctaaa
gaagatgccttcctgacaaaaaacggcgtcaatgaacgacagggctttttattcgccaaa
cctatgcccgccgtttcttttgaacgctggtacaaacgttatcagacgaaaaaaatgcgt
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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