KEGG   Salmonella enterica subsp. enterica serovar Javiana: CFSAN001992_14265
Entry
CFSAN001992_14265 CDS       T02479                                 
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
  KO
K03495  tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
senj  Salmonella enterica subsp. enterica serovar Javiana
Brite
KEGG Orthology (KO) [BR:senj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:senj03016]
    CFSAN001992_14265
   03036 Chromosome and associated proteins [BR:senj03036]
    CFSAN001992_14265
Transfer RNA biogenesis [BR:senj03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    CFSAN001992_14265
 Prokaryotic type
    CFSAN001992_14265
Chromosome and associated proteins [BR:senj03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    CFSAN001992_14265
SSDB
Motif
Pfam: GIDA GIDA_C_1st GIDA_C FAD_oxidored FAD_binding_2 AlaDh_PNT_C Pyr_redox_2 HI0933_like DAO Thi4 Pyr_redox MarR_2 NAD_binding_9 Pyr_redox_3
Other DBs
NCBI-ProteinID: AGF83145
Position
2942599..2944488
AA seq 629 aa
MFYQDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV
KEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI
FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS
IPLSRRLRELPLRVSRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQV
PCYITHTNEKTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADRNQHQIFLEPE
GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK
FIHGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTL
GTKEPYRMFTSRAEYRLMLREDNADLRLTEMGRELGLVDDERWARFNEKLENIERERQRL
KSTWVTPSAESADEVNAHLTTPLSREASGEDLLRRPEMTYAQLTSLAAFAPALEDEQAAE
QVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQ
ASRISGVTPAAISILLVWLKKQGMLRRSA
NT seq 1890 nt   +upstreamnt  +downstreamnt
atgttttatcaggatccttttgacgtcattattattggcgggggtcatgcaggcactgag
gccgcgatggctgcagcgcgtatgggtcaacagactctgcttttgacacacaatattgac
acgttggggcagatgagctgcaacccggcgatcggcggtattggaaagggacatctggta
aaagaggtggatgcgctcggcggtctgatggcgaaagcgatcgatcaggcaggtattcag
tttagaatactaaacgccagcaaaggtccggccgttcgcgctacccgggctcaggcggat
cgagtcttatatcgccaggcggtgcgtaccgcgctggagaaccagccgaacctgatgatc
ttccagcaagcggttgaagatcttattgtcgaaaacgatcgcgttgtcggcgccgtgacc
caaatggggctcaaattccgcgcgaaagcggtggtgctgaccgtcggaaccttcctggac
ggcaaaattcatattggtctggataactacagcggcggtcgtgctggcgatccgccatcc
atcccgctgtctcgccgtctgcgtgagctcccgctacgcgtcagccgcctgaaaaccggc
acaccgccgcgtattgatgcgcgtactatcgatttcagcgtgttggctcaacagcatggc
gataacccgatgccggttttctcgtttatggggaatgcttctcagcatccgcaacaggtg
ccgtgttatatcacgcataccaatgagaaaacccatgacgtgattcgtaataacctcgat
cgtagcccaatgtacgctggcgtgatcgaagggatcggcccacgctactgtccttcgatc
gaagacaaggtgatgcgttttgccgatcgtaaccagcatcagatcttccttgagccggaa
ggactgacctctaacgagatttaccctaacggtatctccaccagcctgccgtttgacgtg
cagatgcagattgtccgttccatgcagggtatggagaacgcgaagatcgttcgccctggt
tacgcgattgagtacgatttcttcgacccgcgcgatctgaaaccgactctggaaagtaaa
tttattcacggcctgttctttgctggtcaaatcaacggtactaccggctatgaagaggct
gcggcgcagggcttgctcgctggtctgaatgccgcgcgtctttccgccgacaaagagggc
tgggcgcctgcgcgctctcaggcttatctcggcgtgctggtggacgatctctgtacgctg
ggcaccaaagagccgtatcgcatgtttacctcccgcgccgaatatcgcctgatgctgcgt
gaggacaatgccgatctgcgtctgaccgaaatgggccgcgagctgggtctggtggatgat
gaacgctgggcgcgcttcaacgagaagctggaaaatatcgaacgagaacgtcagcggctg
aaatcgacatgggtaacgccgtctgcggaatccgccgatgaagtgaatgcgcatttgacc
acgcctctctcccgtgaggccagcggcgaagatctgttgcgtcgtccggaaatgacctac
gcgcagctcacttcgcttgccgcattcgcgcctgcgcttgaagatgagcaagccgctgag
caggtggaaatccaggtcaaatacgaaggttatatcgctcgccagcaggatgagattgaa
aaacaactacgtaacgagaatacgttgctgcctgccacgctggattatcgtcaggtttcc
ggtctgtcgaacgaagttatcgccaagctgaacgatcataaaccggcgtctatcggccag
gcatcgcgtatctccggcgttacgccagcggcaatctccattctgctggtatggctgaaa
aaacaaggtatgctgcgtcgtagcgcttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (30)   

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