KEGG   Salmonella enterica subsp. enterica serovar Javiana: CFSAN001992_18375
Entry
CFSAN001992_18375 CDS       T02479                                 
Symbol
lysS
Name
(GenBank) lysyl-tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
senj  Salmonella enterica subsp. enterica serovar Javiana
Pathway
senj00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:senj00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CFSAN001992_18375 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:senj01007]
    CFSAN001992_18375 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:senj03016]
    CFSAN001992_18375 (lysS)
Enzymes [BR:senj01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     CFSAN001992_18375 (lysS)
Amino acid related enzymes [BR:senj01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   CFSAN001992_18375 (lysS)
Transfer RNA biogenesis [BR:senj03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    CFSAN001992_18375 (lysS)
 Prokaryotic type
   Other AARSs
    CFSAN001992_18375 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: AGF83953
Position
3801991..3803508
AA seq 505 aa
MSEQNAQGADEVVDLNNEMKARREKLAALREQGIPFPNDFRRDRTSDQLHAEFDAKEAEE
LEALNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD
ILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES
RNTFKTRSKILAGIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT
LAQDVLGTTQVPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGI
HVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG
REIGNGFSELNDAEDQAQRFLDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPVK
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgtctgaacaaaacgcacagggcgctgacgaggtagtcgatcttaacaatgaaatgaag
gcacgtcgcgagaagctggctgcactgcgtgagcagggtatcccgttcccgaacgatttc
cgtcgtgaccgtacctcagaccaactgcacgcagagtttgacgcgaaagaagctgaagaa
ctggaagcgctgaatattgaagtgtccgtcgcgggccgtatgatgactcgccgtattatg
ggtaaagcctcttttgttaccctgcaagacgtaggcggccgcattcagctgtatgtggcg
cgcgatgatctgccggaaggcgtttacaacgagcagttcaagaagtgggatcttggcgat
atcctcggcgcgaaaggtaagctgttcaaaaccaaaaccggcgagctgtctatccactgc
accgaactgcgcctgctgacgaaagcgctgcgtccgttgccggataaattccacggcctg
caggaccaggaagcgcgctatcgccagcgttatctggatctcatctctaacgatgaatcc
cgtaacaccttcaaaacccgttcgaagatcctggccggtattcgccagtttatggttgct
cgcggctttatggaagtcgaaacgccgatgatgcaggtgatcccaggcggcgcgtctgcc
cgtccgtttatcacccatcacaacgcgctggatctggacatgtacctgcgtatcgcgccg
gaactgtacctcaagcgtctggtggttggcggcttcgaacgcgtattcgaaattaaccgt
aacttccgtaacgaaggcatctccgtgcgccataatcctgagttcaccatgatggaactc
tatatggcgtatgcggactacaaagacctgatcgagctgacggagtctctgttccgtacg
ctggcgcaggatgttctgggcaccacccaggttccgtacggtgatgaagtgtttgacttc
ggtaagccgttcgaaaaactgaccatgcgtgaagcgatcaagaaatatcgtccggaaacg
gatatggctgatctggacaacttcgattccgcgaaggcgattgctgaaagcatcggcatt
cacgtcgagaagagctggggtctgggccgtatcgtcaccgagatctttgacgaagtcgct
gaagcgcatctgattcagccgaccttcatcaccgaatatccggctgaagtgtctccgctg
gcgcgtcgtaatgatgtgaacccggaaatcactgaccgcttcgagttctttatcggcggt
cgtgaaatcggtaatggctttagcgagttgaacgatgcggaagaccaggcgcagcgtttc
ctggatcaggttaatgcaaaagcggcaggcgatgacgaagccatgttctacgacgaagac
tacgtgacggcgctggaacacggtttaccgccgacagcgggtctgggaattggtatcgac
cgtatggtgatgctgtttactaacagccacacgattcgcgacgttattctgttcccggcg
atgcgtccggtgaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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