KEGG   Salmonella enterica subsp. enterica serovar Typhi Ty21a: TY21A_07840
Entry
TY21A_07840       CDS       T02648                                 
Name
(GenBank) ATP-dependent RNA helicase HrpA
  KO
K03578  ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
Organism
sent  Salmonella enterica subsp. enterica serovar Typhi Ty21a
Brite
KEGG Orthology (KO) [BR:sent00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sent03019]
    TY21A_07840
Enzymes [BR:sent01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     TY21A_07840
Messenger RNA biogenesis [BR:sent03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     TY21A_07840
SSDB
Motif
Pfam: DUF3418 OB_NTP_bind Helicase_C HA2_C DEAD HA2_N AAA_22 AAA_19 T2SSE nSTAND3 NACHT AAA_16 ResIII PhoH NTPase_1 SLFN-g3_helicase
Other DBs
NCBI-ProteinID: AGK67132
Position
complement(1598822..1602742)
AA seq 1306 aa
MLPKSFMTEQSTLTLQVLQQRLDALMLRDKQRFSRRLHGVKKVKNPDAQQAIFQTMAKEI
EQAATQVALREAARPSITYPQNLPVSQKKQDILEAVRDHQVVIVAGETGSGKTTQLPKIC
MELGRGIKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSSNTMVKLMT
DGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKVIITSATIDP
ERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGRESPGDIL
IFMSGEREIRDTADALNKLNLRHTEVLPLYARLSNSEQNRVFQSHSGRRIVLATNVAETS
LTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE
DDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA
ITADEQQTAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP
VDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRLCRTDYLNYLRVREW
QDIYTQLRQVVKELGIPVNSEPAEYREIHVALLTGLLSHIGMKDADKQEYTGARNARFSI
FPGSGLFKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQG
AVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRA
EVEELEHKSRRRDILVDDDTLFEFYDQRISHDVISARHFDSWWKKISRETPDLLNFEKSM
LIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVDESGFEWQ
IPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALERELRRMTGVT
VDREDWHWDQVPEHLKITFRVVNDKNKKLQEGRSLAELKNALKGKVQETLSAVADDGIEQ
SGLHIWSFGELPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQQQAMWCGLRRLL
LLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIACGVDKLIDANGGPVWSEAGF
TALHEKVRAELNDTVVDIAKQVERILTTVFNINKRLKGRVDMSMALGLSDIKAQMSGLVY
RGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDREQMLKVESVQQAWQQWINKLPPA
RREDDDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMDQITA
NT seq 3921 nt   +upstreamnt  +downstreamnt
atgctgcccaagagctttatgactgaacaatctacgttgacgcttcaggtgttacagcag
cggctggatgcactgatgctgcgcgacaaacagcgcttttcgcgccgcctgcatggcgta
aagaaagtaaaaaatcctgatgcgcaacaggccattttccagacgatggcgaaagaaatt
gaacaggctgcgacgcaggtcgctctccgcgaagcggcgcgcccctcaatcacttatccg
caaaatctgcctgttagccagaagaaacaggacattctggaagcggtccgcgatcatcag
gtggtgatcgtggcaggggaaaccggttccggtaaaaccacccagttgccgaaaatttgt
atggaactgggacgcggaattaaaggacttattggacatactcaaccgcgtcgtctggcg
gcgcgcaccgtcgctaaccgcattgccgaagagttgcaaacggagcctggcggctgcatc
ggctataaagttcgtttcagcgatcatgtcagtagcaacaccatggtcaaactgatgacg
gacggtatcctgctggcggaaatccagcaggacaggctattgatgcagtacgacaccatc
attattgatgaagcgcatgaacgcagcctgaatattgacttcttgctcggctatctgaaa
gagcttctgccgcgtcgccccgatctgaaagtgattattacctctgcgaccatcgacccg
gaacgcttctcgcgccactttaataacgcgccgattatcgaagtctctggccgaacgtat
cccgtagaagttcgttatcgccccatcgtggaagaggctgacgacactgaacgcgatcag
ctacaggcaattttcgacgctgttgatgaactggggcgtgaaagtcctggcgatatcctg
atttttatgagcggagagcgggaaatccgcgataccgccgatgccctgaacaagctgaac
ttacggcataccgaagtgttgccgctgtatgcacgcttgtcgaacagcgaacagaaccgc
gttttccagtcgcacagcggacgccgtatcgtgctggcgactaacgtggcggaaacctcg
ctgacggtgccgggtatcaaatatgtgatcgatcctggcactgcgcgcatcagccgctac
agctaccgcactaaagtgcagcgcctgccgattgaaccgatctcacaggcttccgccaat
cagcgtaaagggcgttgcggacgcgtatcggaagggatctgcattcgtctgtattcggaa
gatgactttttgtcacgcccggaatttaccgacccggaaattctacgtaccaacctggcg
tcggttattttgcagatgaccgccctgggactgggtgacatagccgccttcccgtttgtc
gaagcgccggataagcgcaatattcaggatggcgtgcgtttgttggaagagctgggggcg
attaccgccgacgaacagcaaacggcatataagctgacgccgctgggccgacaattatcc
cagttgccggtcgacccgcgcctggcgcgtatggttctggaagcgcaaaaacatggctgt
gtgcgcgaagcgatgatcattacttccgcactctctattcaggatccgcgcgagcgccca
gtggataagcagcaggcttccgatgagaaacaccggcgtttccatgataaggaatccgat
tttctggcgtttgttaacctgtggaattacctcggcgagcaacaaaaggccctgtcgtcg
aatcaattccgccgtctgtgtcgcaccgactatctgaactatttacgcgtgcgtgagtgg
caggatatctatacccaactgcgtcaggtggtaaaagaactggggattccggtaaacagc
gaacccgcagaataccgggaaattcacgttgcgttgttaacggggctgttgtcgcatatc
gggatgaaagatgccgataaacaagagtacaccggcgcgcgtaacgcccgattctctatt
ttccccggatccggtttattcaaaaaaccgccgaaatggacaatggtcgccgagctggtg
gaaaccagccgtttgtgggggcgcatcgctgcccgcattgagccagaatgggtggaaccg
gtagcccagcacctgattaaacgttcatatagcgaaccgcactgggagcgggcgcaaggc
gcggtgatggcgacggaaaaggttactgtctacggtctgccgattgtcgccgcgcgcaag
gtgaattatagccagattgacccggcgttgtgtcgcgagttgtttatccgccatgcgctg
gtggagggggactggcaaacccgtcacgccttcttccgtgagaatctaaaattgcgtgcg
gaagtcgaggaacttgagcacaaatctcgccgccgcgatatcctggtggatgacgatacc
ctgtttgagttttatgaccagcgtattagccatgacgttatttccgcccgccactttgat
agttggtggaaaaaaatcagccgcgagacgccggatctgctcaactttgaaaaaagtatg
ctgattaaagaaggcgcggaaaaaatcagcaaactggattacccgaatttctggcaccag
ggcaatctcaagctgcgtttgagctatcagtttgaaccgggcgcggatgctgacggcgtg
accgtccatattccgttgccgctacttaaccaggttgacgagagcggttttgaatggcag
atcccagggctgcgccgtgaattagtgattgcgctgattaaatcgttgccaaaaccggta
cgtcgcaactttgttccggcgccaaactatgctgaagcgtttttaggtcgcgtaacgccg
ctggagctgccgctgctggacgctctggagcgtgaactgcgccggatgaccggcgtcacg
gtcgatcgggaagactggcattgggatcaggtgcccgagcatctgaaaatcacgtttcgc
gtggtgaatgacaaaaacaagaaactgcaggaagggcgttcgctcgccgagcttaaaaat
gcgctgaaaggcaaagtgcaggagacgctctcggcggtagcggatgacggcatcgagcag
agcgggctgcatatctggagtttcggcgagctgccggaaagctacgaacagaaacgcggt
aattataaagtgaaggcgtggccggcgttagtggatgagcgtgacagcgtcgctatcaaa
ttgtttgataatccgctggaacaacaacaggcgatgtggtgcggtttacgccgtctgctg
ttgctcaatattccttcaccgattaagtatctgcatgagaaattgccgaataaagccaag
ctggggctgtactttaacccgtacggcaaagtactggagttgattgatgactgtatcgcc
tgcggggtagataagctgatagatgccaacggcgggccggtgtggagcgaagcaggtttc
accgcgctgcacgaaaaggtacgcgccgagctgaatgatactgtggtggatatcgcgaag
caggttgagcggatcctgacgaccgtattcaatatcaataagcgtctgaaagggcgggtg
gatatgagcatggcgttggggctttccgatatcaaggcgcagatgagcggtctggtatac
cgtggttttgtgactggcaacggctttaaacgtctcggcgatacgctgcgttatctgcag
gcaattgaaaagcggctggagaaactggctgtcgatccgcaccgcgatcgggagcaaatg
ctgaaagtcgaaagcgtccagcaggcgtggcaacaatggataaataaattgcctccagcg
cgtcgcgaagatgatgatgttaaagagatccgttggatgattgaagaactgcgtgtcagt
tatttcgcccaacagctcggtacgccttatcctatttccgataagcgtattttacaggcc
atggatcagattacggcctaa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (22)   

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