KEGG   Sodalis endosymbiont of Henestaris halophilus: HBA_0018
Entry
HBA_0018          CDS       T05311                                 
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
seny  Sodalis endosymbiont of Henestaris halophilus
Pathway
seny03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:seny00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    HBA_0018 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:seny03400]
    HBA_0018 (recD)
Enzymes [BR:seny01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     HBA_0018 (recD)
DNA repair and recombination proteins [BR:seny03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HBA_0018 (recD)
SSDB
Motif
Pfam: RecD_N AAA_19 AAA_30 Viral_helicase1 Helicase_RecD UvrD_C_2 AAA_11 SH3_13 UvrD-helicase AAA_22 DEAD SLFN-g3_helicase FtsK_SpoIIIE UvrD_C PhoH AAA_16 MukB nSTAND3 Flavi_DEAD CbiA ResIII SRP54 AAA DUF4363 AAA_29 AAA_28 T2SSE AAA_24 TrwB_AAD_bind
Other DBs
NCBI-ProteinID: SNC58300
UniProt: A0A2C8CYF4
Position
I:37753..39600
AA seq 615 aa
MEKILAEAQQLHLFRPLDVQFARMLATSADPTLMLASACLSANASSGHVCLPLERLMPAQ
LFNGRMPLLAQQAWLRAGRPSLEEWQKILLNSKAVSSGSHPTPLVLDKQRLYLQRMWRYE
CKVAQFFKRRPPPAEYNGTNIASVLTRYFPSDGTVINWQKIAAAVAITRPVALISGGPGT
GKTTTVAKMMAAFLQLNNNKRLRMIMAAPTGKAASRLSESLGLALKRLGLNEQQKQLLPL
EAITLHHLLGAQPNSQKMIYHQDNQLQVDILIIDEASMIDLTMMANLIAALPPQARVIFL
GDRFQLSSVEAGAVLSDICQFAESGYSSERRAELSRLTGFTLSEDDTGCCGYGVADSLCL
LRNNYRFDESSGINRLANIIHTGDYKGAIKLLKAGIERDINYKQLRDAEEYLRMLNDCID
GYKDYLQQVHKHDAPDKILESFNRFRLLCALREGPFGIAGLNERIKWALSNSGLIALDNT
AHWYAGRPVMILRNAPELDLYNGDIGIFLWDSQQTLRVHFSLPVGGVKTISLRRLPEHET
AFAMTVHKSQGSEFHHTALVLPNKILPVLTRELFYTAVTRARSRLSIYATEKVLQHIIKT
KTLRSSGLIERLATD
NT seq 1848 nt   +upstreamnt  +downstreamnt
atggaaaaaattcttgccgaagcgcaacagttacatttatttcgaccactggacgtccaa
ttcgcccgaatgctagctacatcagccgaccctacactaatgttggctagcgcctgcctt
agcgctaatgccagttcaggacatgtttgcctacccctagaacgattaatgcctgcgcaa
ctatttaacggccgtatgccgttactagcgcagcaggcttggttgcgggccggtagacct
tctcttgaagaatggcaaaagatactgctaaattccaaggcagttagctccggttcgcat
ccaacgccactagtactagataagcagagattatatttacaacgcatgtggcgctatgaa
tgcaaagtggcacagtttttcaaacgtcgaccgccacctgcagaatataacggaactaac
atcgcctcggtccttacacgttatttccctagcgacggcacagtaatcaattggcaaaaa
atcgcggcagcagtcgcgataacacgcccagtcgcactgatatctggaggtcctggcact
ggtaaaaccacaactgtagccaagatgatggctgcttttctgcagttgaacaacaacaaa
cgcttacgcatgattatggctgcccctacgggtaaagcagcatcgcgcctgagcgaatct
cttggcttggccttaaagcgactggggctaaatgaacaacagaaacaactgctgccgctt
gaggcaataacgctgcaccatttgctcggagcgcagcccaatagccaaaagatgatttat
catcaagacaatcagctacaagtagatattttgattattgatgaagcgtcaatgattgat
ttgacgatgatggctaatttgattgcagcgctaccgccgcaagcgcgagtgatatttttg
ggggatcgttttcagttatcctcggtggaggcaggagcagtattgagcgatatctgccag
ttcgcagagagtggatacagctccgagcgacgcgcggagctgtcgcgtctaacgggcttt
acgctatcggaagatgatacaggatgctgcggttatggagtcgccgatagtttatgcctg
ctccgtaataactaccgctttgatgaaagttccggtattaaccgactagcaaatattata
cacactggcgattacaagggtgcgataaagttgcttaaagccggcatcgagagggatatc
aactacaagcagttacgtgatgcagaggaatatctgcgtatgctaaacgactgcattgac
ggctataaagactatttgcagcaagtgcacaaacacgatgcaccggacaaaattcttgaa
tcctttaaccgattccgactgttgtgtgcgctgcgagaaggaccattcgggatcgctggc
cttaacgaacgtattaagtgggctttaagcaactcggggctgatcgctctcgataatacc
gcacactggtacgcagggcgtccggtaatgatattacgcaacgcaccggaactagatctg
tataacggtgatatcggtatctttctttgggacagtcaacagacgctacgcgtgcatttc
tccctaccagtaggtggtgttaaaactatatcgttgagacgattacctgagcatgaaacg
gcgttcgcgatgacggtacataaatctcagggatcggaattccatcacacagccttagtg
ttacccaataaaatattaccagtattaacgagagagctgttctatactgctgtgacacgt
gcacgctcacgtttatctatatacgctacagagaaggtattgcagcacattattaaaact
aaaaccctgcgaagcagtggccttatcgaacgacttgccaccgattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (29)   
   Pfam (29)   
All databases (39)   

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