KEGG   Seonamhaeicola sp. S2-3: BWZ22_12205
Entry
BWZ22_12205       CDS       T04683                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
seon  Seonamhaeicola sp. S2-3
Pathway
seon03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:seon00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BWZ22_12205
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:seon03400]
    BWZ22_12205
DNA repair and recombination proteins [BR:seon03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BWZ22_12205
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BWZ22_12205
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII DEAD UVR AAA_30 AAA_22 AAA_16 DUF87
Other DBs
NCBI-ProteinID: APY11944
UniProt: A0A1U7DTY5
Position
complement(2805705..2807708)
AA seq 667 aa
MRFKIESEFSPTGDQPQAIKQLAEGIRSNEKYQTLLGVTGSGKTFTVANVIEEVQRPTLV
LAHNKTLAAQLYSEFKQFFPNNAVEYFVSYYDYYQPEAYIPVSGVYIEKDLSINEEIEKM
RLSTTSSLLSGRRDVLVVASVSCLYGIGNPVEFQKNVVTLERDQEISRTKLLHQLVQSLY
SRTEAEFNHGNFRIKGDTVDIFPSYADNAFRIHFFGDEIEEIESFDIQTNQVIEKYDRLN
IYPANMFVTSPDVLQNAIKDIQDDLVKQYNYFKDIGKHLEAKRLKERTEFDLEMIRELGY
CSGIENYSRYLDGRQPGTRPFCLLDYFPDDFLMVVDESHVTISQVHAMYGGDRSRKENLV
EYGFRLPAALDNRPLKFEEFEALQNQVIYVSATPADYELQKTDGVYVEQVIRPTGLLDPE
IEVRPSLNQIDDLIEEIQQRVEKDERTLVTTLTKRMAEELTKYLDRIQIRCRYIHSDVDT
LERVEIMQDLRKGLFDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRSARSLTQTVGRA
ARNINGKAIMYADKITKSMQKTIDETNYRRKKQIDYNTKNNIKPKALNKSLDNALAKNSV
STYKYELDAKKAAEPESDYLTKPELEKKIKEKRKQMEAAAKALDFIVAAKLRDEIKAYQE
KIKKLKV
NT seq 2004 nt   +upstreamnt  +downstreamnt
atgcgttttaaaatagaatcagaatttagtcctacaggagatcaaccccaagctataaaa
cagttagcagaaggcatacgctccaatgaaaaatatcaaactcttttaggtgtaacaggc
tctggtaaaacctttaccgttgcaaatgttattgaagaagtacagcgccctaccctagtt
ttagcacacaacaaaactttagctgcccaattatattcagagtttaaacaattttttcca
aacaacgcggtagaatactttgtttcatactatgattactaccaaccagaagcctacatt
cctgtttctggcgtttatatagaaaaagatttatctataaacgaagaaattgaaaaaatg
cgcttaagcactacatcttctctactttcaggcagaagagatgttttagttgtagcctca
gtttcctgtttgtacggtattggaaaccctgttgaatttcaaaaaaatgtggtaacacta
gaaagagatcaagaaatttctagaaccaaattactacatcagctagttcaaagtttatat
tcaagaaccgaagctgaattcaatcatggcaattttagaataaaaggtgatactgttgat
atttttcctagttatgctgataatgcttttcgtatccattttttcggagatgaaattgaa
gaaatagaatcatttgatattcaaaccaatcaagttattgaaaaatatgacagattaaat
atatatcctgccaatatgtttgtaacctctcccgatgtgttgcaaaatgccataaaagat
attcaggacgatttagtaaaacaatacaattattttaaagatattggaaaacatttagaa
gctaaacgtttaaaagagcgcactgaatttgatcttgaaatgattcgtgaacttggttat
tgctctggtatagaaaactattctagataccttgacggaagacaaccaggtacgcgcccc
ttttgtttattagattattttcctgatgactttttaatggtagttgatgaaagccatgta
accatatcacaagtacatgccatgtatggcggtgatagaagccgaaaagaaaacttagta
gaatacgggtttaggcttcctgctgctttagataacagacctttaaaatttgaagaattt
gaagccttacaaaaccaagttatttacgtaagtgctacgcctgcagattacgaattgcaa
aaaacagatggcgtttatgtagaacaagtaattagaccaacaggtttattagatcctgaa
attgaagtacgccccagtttaaaccaaatagatgatttaattgaagaaattcaacaacgt
gttgaaaaagacgaacgcactttagtaactacccttaccaaaagaatggcagaagaattg
actaaatatttagatagaattcaaattagatgccgctacatacacagtgatgtagatact
ttagagcgcgttgaaataatgcaagatttacgcaaagggttatttgacgttttagttggt
gtaaatttattaagagaaggtctagatttaccagaagtgtctttagttgctattttagat
gctgataaagaaggttttttacgttctgcacgctctttaacacaaactgttggtagagct
gctagaaatattaatggaaaagctattatgtacgctgataaaataaccaaaagcatgcaa
aaaactattgacgaaactaattacagacgtaaaaaacaaatagactacaatactaaaaac
aacattaaaccaaaagcattaaataaaagtttagataatgctttagccaaaaactcggtt
agtacttataaatacgaattagatgctaaaaaagccgcagaacctgaaagtgactattta
actaaacctgaattagagaaaaagataaaagaaaaacggaaacaaatggaagcagctgcc
aaagccttagattttattgtggctgctaaattaagagatgaaataaaagcctaccaagaa
aaaataaaaaagctaaaagtttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (153)   
   KEGG ORTHOLOGY (1)   
   RefGene (150)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (168)   

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