KEGG   Staphylococcus epidermidis RP62A (MRSE): SERP2548
Entry
SERP2548          CDS       T00229                                 
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
ser  Staphylococcus epidermidis RP62A (MRSE)
Brite
KEGG Orthology (KO) [BR:ser00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ser03032]
    SERP2548 (gyrA)
   03400 DNA repair and recombination proteins [BR:ser03400]
    SERP2548 (gyrA)
Enzymes [BR:ser01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     SERP2548 (gyrA)
DNA replication proteins [BR:ser03032]
 Prokaryotic type
  DNA Topoisomerases
   SERP2548 (gyrA)
DNA repair and recombination proteins [BR:ser03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SERP2548 (gyrA)
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C Retrotran_gag_2
Other DBs
NCBI-ProteinID: AAW53372
UniProt: Q5HK04
Position
complement(2607094..2609775)
AA seq 893 aa
MAELPQSRINERNITSEMRESFLDYAMSVIVSRALPDVRDGLKPVHRRILYGLNEQGMTP
DKPYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYPLVDGQGNFGSMDGDGAAA
MRYTEARMTKITLELLRDINKDTIDFIDNYDGNEREPSVLPARFPNLLVNGAAGIAVGMA
TNIPPHNLTEVIDGVLSLSKNPDITINELMEDIQGPDFPTAGLVLGKSGIRRAYETGRGS
IQMRSRAEIEERGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRT
GVRVVIDVRKDANASVILNNLYKQTPLQTSFGVNMIALVNSRPKLINLKEALIHYLEHQK
TVVRRRTEYNLKKARDRAHILEGLRIALDHIDEIITTIRESDTDKIAMASLQERFKLTER
QAQAILDMRLRRLTGLERDKIESEYNELLEYIKELEEILADEEVLLQLVRDELTEIKERF
GDERRTEIQLGGLEDLEDEDLIPEEQIVITLSHNNYIKRLPVSTYRSQNRGGRGIQGMNT
LDEDFVSQLVTMSTHDHVLFFTNKGRVYKLKGYEVPELSRQSKGIPIINAIELENDETIS
TMIAVKDLESEEDYLVFATKQGIVKRSSLSNFSRINKNGKIAINFKEDDELIAVRLTTGN
EDILIGTAHASLIRFSESTLRPLGRTAAGVKGISLREGDTVVGLDVADSESEDEVLVVTE
NGYGKRTPVSEYRLSNRGGKGIKTATITERNGNIVCITTVTGEEDLMVVTNAGVIIRLDV
HDISQNGRAAQGVRLMKLGDGQFVSTVAKVNEEDDNEENADEAQQSTTTETADVEEVVDD
QTPGNAIHTEGDAEMESVESPENDDRIDIRQDFMDRVNEDIESASDNEEDSDE
NT seq 2682 nt   +upstreamnt  +downstreamnt
atggctgaattacctcaatcaagaattaatgaacgaaatataaccagtgaaatgcgtgaa
tcattcttagactatgctatgagtgttatcgtttctcgtgcattacctgatgttagagac
ggattaaagccagtacatcgtcgtattctttatggtttaaatgaacaaggtatgacgccc
gataaaccttataagaaatctgcacgtatagtcggggatgtcatgggtaaatatcaccct
catggtgattcttcaatttatgaagcaatggtaagaatggcccaagactttagttatcgt
tatccacttgtagatggtcaaggtaactttggctctatggatggtgacggggcagccgca
atgcgttataccgaagcacgtatgactaaaataacattagaacttttacgtgatatcaac
aaagacacaattgattttattgacaactatgatggtaatgaaagagagccgtcagtctta
cctgcacgtttccctaacttactagtaaatggtgcggcaggaattgccgtaggtatggct
acaaatattcctccccacaatttaactgaagttattgatggtgtgctcagtttaagtaag
aatccagacatcacaattaatgagctgatggaagacatccaaggtcctgattttcctaca
gccggtttagtactagggaaaagtggtattcgtcgagcttatgaaacaggtcgtgggtca
attcaaatgcgttctcgtgctgaaatagaagaacgtggtggtggccgtcaacgtattgtc
gtaacggaaatacctttccaagtcaataaagcgcgtatgattgaaaaaatcgcagagtta
gttagagataagaaaatcgacggtattacagatttacgtgatgaaacaagtttgcgtaca
ggtgtaagagtagttattgatgtacgtaaagatgcaaatgcgagtgttattttaaataat
ttatataaacaaactccattacaaacatcatttggtgtgaatatgattgctttagtgaat
agtagacctaaactaatcaatttaaaagaagcacttatccattacttagaacaccaaaaa
acagtggttagacgacgtactgaatataatcttaaaaaagcaagagaccgtgcccatatt
ctagaaggtttacgaatagcactagatcatattgatgaaattatcacaacaattcgtgaa
tcggacactgataaaattgcgatggcaagtttacaagagcgttttaaactaactgaacgt
caagctcaagcaattttagatatgcgtttaagacgtttaactggattagaaagagataaa
atagaatctgagtataatgaacttctagaatatattaaagagttagaagagattttagct
gatgaagaagtactattacaattagttcgtgatgaattgactgaaattaaagaacgtttc
ggcgatgaacgtcgcactgaaattcaattaggtggtctagaagatcttgaagatgaagac
ttaatccctgaagaacaaattgttattacattaagtcataataactatattaaacgttta
ccagtatctacatatcgttctcaaaatcgtggtggtcgtggcatacaaggtatgaacacg
ttggatgaggacttcgttagtcaattggtaacaatgagtacacatgatcatgttctgttc
tttacgaataaaggtcgtgtatataaactcaaaggttatgaagttcctgagttgtcacgt
caatccaaaggcatacctattattaatgcgattgaactcgaaaatgacgaaacaataagt
acgatgattgcagttaaagaccttgaaagtgaagaagattatctcgtattcgcgacaaaa
caaggtatcgttaaacgttcatcattaagtaacttctcccgtattaacaaaaacggtaaa
attgcaattaactttaaagaagatgatgaattaattgcagtacgtctaacaacaggtaat
gaagatattcttattggaactgcacatgcatcattaattagattttctgaatctacatta
cgcccattaggccgtacagcagcaggtgtgaaaggtatttctctacgtgaaggggatact
gtcgttggtcttgatgttgcagattcagaaagtgaagatgaagtattagtagttactgaa
aatggttacggtaaacgtacacctgttagcgaatatcgtttatcaaatcgtggtggtaaa
ggaatcaaaactgcgacaattaccgagcgtaatggtaacatcgtttgtatcacaactgta
accggtgaagaggatttaatggttgtaactaacgctggtgttattattcgtcttgacgtt
catgatatttctcaaaatggacgtgcagcacaaggtgtacgccttatgaaactcggagat
ggtcaatttgtttctactgttgctaaagtaaacgaagaagacgataatgaggaaaatgca
gatgaagcgcaacaatctactactactgaaacagcagatgtagaagaggtagtggatgat
cagacaccaggcaatgcgattcatacagaaggtgatgcagaaatggaatctgtagaatct
cctgaaaatgatgatcgtattgatatcagacaagattttatggatagagtgaatgaagat
atcgagagtgcttcagataatgaagaagatagtgatgaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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