KEGG   Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_15230
Entry
STU288_15230      CDS       T02639                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
setu  Salmonella enterica subsp. enterica serovar Typhimurium U288
Pathway
setu00300  Lysine biosynthesis
setu00470  D-Amino acid metabolism
setu01100  Metabolic pathways
setu01110  Biosynthesis of secondary metabolites
setu01120  Microbial metabolism in diverse environments
setu01230  Biosynthesis of amino acids
Module
setu_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:setu00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    STU288_15230
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    STU288_15230
Enzymes [BR:setu01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     STU288_15230
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC
Other DBs
NCBI-ProteinID: AGK10644
Position
complement(3170284..3171546)
AA seq 420 aa
MSLPHYHAETDLNAENLLRLPAEFGCPVWVYDAHIIRRQIAALQQFDVVRFAQKACSNIH
ILRLMRALGVKVDSVSLGEIERALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVN
AGSVDMLTQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQK
YRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVLECGQDVEAISAGGGLSIPYREGEEPVD
TRHYYGLWNAAREQIARHLGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDA
GFNDLMRPAMYGSYHRISALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRA
LPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALEML
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgtcattgccgcattatcacgctgaaactgaccttaacgctgaaaatttgctcagattg
cctgctgaattcggctgtccggtctgggtctatgacgcgcacattattcgccgtcagata
gccgccctgcagcagtttgacgtcgtgcgttttgcgcaaaaagcctgttcgaacattcat
atcctgcgcttaatgcgcgcgctgggcgtcaaggtggattctgtttcattgggagagatc
gaacgtgcgctggcggcgggctacgatccgcaaacgtgccctgatgatatcgtttttacc
gccgatgtgattgacgccgccacgctggcgcgcgtcagcgaactgcatattccggtcaat
gccggctcggtagatatgctgacgcagcttggtcaggtttcgcctgggcatcgcgtctgg
ttgcgcgtgaatcctggctttggtcacggccacagccagaaaaccaacaccgggggcgaa
aacagcaaacacggcatctggcatagcgatcttccggcggcgctggcggtaatgcagaaa
taccgactgaaacttgtcggtatccatatgcacattggttccggcgtcgattatggccat
ctggagcaggtttgcggcgcgatggtacgccaggtgctggaatgtggtcaggatgtggag
gcgatttcggcaggcggcggactctcgataccttatcgtgagggagaagagcccgttgat
acgcgccattactatggcctgtggaacgcggcgcgcgagcaaatcgcccgccatctggga
catgcggtcaaacttgagatcgaacctggacgttttctggtggcgcaatcgggcgtgctg
gtaacgcaggtgcgtagcgtaaaacagatgggaagccgccatttcgtgctggtcgacgct
ggttttaacgatctgatgcgcccggcgatgtacggtagctatcaccgtatttcggcgctg
gcggcggatggtcgcgcgcttgaaaatggcccgtgggtcgagacggtggtagccgggccg
ctatgcgaatcaggcgatgtttttacgcagcaggaagggggaatggttgaaacacgcgcc
ttacctgcggtcatccccggcgattacctcgtattgcacgataccggcgcgtacggcgcg
tctatgtcatcgaattacaacagccgcccgctcctgccggaagtgctgtttgacaatgga
caggcgcggctgatccgccgtcgtcaaaccattgaagagctgttagcgctggagatgctc
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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