KEGG   Spirochaeta africana: Spiaf_0658
Entry
Spiaf_0658        CDS       T01811                                 
Name
(GenBank) DNA/RNA helicase, superfamily I
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
sfc  Spirochaeta africana
Pathway
sfc03420  Nucleotide excision repair
sfc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sfc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Spiaf_0658
   03430 Mismatch repair
    Spiaf_0658
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfc03400]
    Spiaf_0658
Enzymes [BR:sfc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Spiaf_0658
DNA repair and recombination proteins [BR:sfc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Spiaf_0658
   MMR (mismatch excision repair)
    Other MMR factors
     Spiaf_0658
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30
Other DBs
NCBI-ProteinID: AFG36758
UniProt: H9UGW5
Position
759989..762130
AA seq 713 aa
MDTSSVLSGLNETQKAAVLHRGAPLLILAGAGSGKTRVITIKIAHLIAQGVDPRSILAVT
FTNKAANEMRERAAQLHPGASQAMIRTFHSFGAWLLRRNAAAVGLPREFSIYDDDDQVSL
LGTLYPQYTKQVVKGYARAISRAKDFGLTPEDDLSPVGSDSEFPQIYRTYTDNLRKIGNV
DFGDLILLPQQLLAGNAAIGGRIRDRFRIVLVDEYQDSNIAQYKLLQSLTDSYSYVCVVG
DDDQSIYRFRGAEVRNIIDFPEHFPGTDIVRLEQNYRSTGSILQVAHAVVSRNQGRLGKQ
LWTENPDGSPPVIAHLFDQDQEVEYCTEVLMQGSPGETAILYRTNAQSRAFETAFLRGGI
PYRIVGTLRFYEREEVKDAIALLRFTANPRDPISLARIINKPARGIGKKSVEKILERAGD
GDLLQAMRAAIPHLTTRSGGAVEKCRGMLQDIIGDLGAGKHELLSDLLHAALMASGLWQY
HREQDEVAGLQKIQNLEELENAAGMYPATTDGLIEFLEAIELDSGAQQDAGEDAVTLITM
HNTKGLEFDRVIITGMDEGIFPRESDLDPDSLEEERRLFYVAVTRARKELHMTTTRMRRV
HGRIVDTSPSRFLYEIPRDLVEFAGAYSPGHGSPAGGSFGSPGGSPAGSDPAAADNSPYP
RGCGVYHDDYGSGRVVRSDIKDGELVVLVQFETGRTARFLPAYSPLERISIDD
NT seq 2142 nt   +upstreamnt  +downstreamnt
atggataccagctccgtactgtccggcctgaacgaaacccaaaaggccgcggttctgcac
cgcggcgccccgctgttgattcttgccggcgcaggttccggtaaaacccgggttattacc
attaaaattgcccacctcattgcacagggtgtcgatccgcgttcgatcctggcggttacc
tttaccaacaaggccgccaacgagatgcgcgagcgggctgcacagctgcatcccggggct
tcacaagccatgatccgcacctttcacagctttggcgcctggcttttgcggcgcaatgcc
gccgcggtcgggctgccgcgcgagttttcaatatacgatgacgacgaccaggtcagtttg
ttgggaactctgtatccgcagtacaccaaacaggtggtaaagggctatgcccgggcgatc
tcgcgggccaaggacttcggtcttaccccggaggatgatctgagtccggtggggtcggac
agcgagttcccgcagatctaccgtacctacaccgacaatctgcgcaagatcggcaacgtt
gatttcggggacctgattctgctgccgcagcagctgctggcaggcaatgcagccattggc
gggcgtatccgggatcgctttcgtattgtgctggtagacgagtaccaggacagcaacata
gcccagtacaagctgctgcagagcctgaccgacagctacagctatgtttgtgtggtaggt
gacgatgatcagtcaatctaccgctttcgcggggcagaggtgcgcaacatcatcgacttt
cccgagcactttccgggtacagatattgtgcggctggaacagaactaccgttctaccggc
tcgatcctgcaagtggctcatgcggttgtgtcgcgcaaccaggggcggctgggcaagcag
ctgtggacagagaacccggatggcagccctcctgtcattgctcatctgtttgatcaggac
caggaagtggagtactgcaccgaggtgctgatgcagggatcccccggggaaaccgcaatc
ctgtatcgcaccaatgcccagtcacgtgcctttgagaccgcgtttctgcgcggcgggata
ccctatcgcatagtcggtaccctgcgattctacgagcgcgaagaggtaaaggatgccatc
gccctgctgcggtttacggctaacccgcgcgatccgatctcgctggcccgcataatcaac
aagcctgcgcggggaatcggcaagaagagtgtggagaaaatactggagcgtgccggagac
ggggatctgcttcaggcaatgcgggcggctattccccacctgaccacgcgctccggcggg
gcggtcgagaaatgccgaggtatgctccaggatattatcggcgatctgggtgcggggaag
cacgagctgctcagcgatctcctgcacgctgcgctgatggcctccgggctgtggcagtac
caccgcgaacaggacgaggtcgccgggctgcagaaaatccagaacctggaagagctggag
aatgctgccggaatgtatccggcaaccaccgacggtctgatcgagtttctcgaggcgatc
gaactggacagcggcgcccagcaggacgccggtgaggatgcggttaccctgatcaccatg
cataataccaaggggctggagttcgaccgggttattatcaccggtatggatgaaggaatt
tttccccgcgagagtgatctggacccggacagcctggaagaggaacgccggttgttctat
gtagccgttacccgagcacgcaaggaactgcatatgacaaccacccgcatgcgtcgggtg
catgggcgtatcgtcgacacctcgccctcgcgcttcctgtacgaaattccgcgtgatctg
gtcgagtttgccggggcgtacagcccgggacacggcagtccggccggcggctcattcggc
agtccggggggcagccctgccggcagcgaccccgccgcagctgataactcgccctatccc
cgcggctgcggtgtgtatcacgatgattacggcagcggccgggtagtgcgctccgatatc
aaggatggcgaactggtggtgctggtgcagttcgagaccggccgtacagcccgctttctg
ccggcctacagccccctggaaaggattagtatagatgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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