KEGG T01883: SFxv

Shigella flexneri 2002017 (serotype Fxv): SFxv_1028

Entry

SFxv_1028         CDS       T01883

Symbol

rlmL

Name

(GenBank) putative oxidoreductase

K12297

23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]

Organism

sfe Shigella flexneri 2002017 (serotype Fxv)

Brite

KEGG Orthology (KO) [BR:sfe00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sfe03009]
    SFxv_1028 (rlmL)
Enzymes [BR:sfe01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.173  23S rRNA (guanine2445-N2)-methyltransferase
     SFxv_1028 (rlmL)
    2.1.1.264  23S rRNA (guanine2069-N7)-methyltransferase
     SFxv_1028 (rlmL)
Ribosome biogenesis [BR:sfe03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SFxv_1028 (rlmL)

SSDB

Motif

Pfam:

UPF0020 THUMP Methyltrans_SAM Cons_hypoth95 Methyltransf_31 Methyltransf_25 MTS Methyltransf_11 Methyltransf_15 N6_Mtase Methyltransf_24

Other DBs

NCBI-ProteinID:

ADA73294

UniProt:

D2ABK3

Position

1004562..1006670

AA seq 702 aa
MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP
LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF
TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA
IVMRSGWQSGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK
AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK
GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD
KQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYANRLRKNLKKFEKWARQEGIECYRL
YDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLK
TRERHKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGK
DFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTRRAHRLIQADCLA
WLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRG
FRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITAA

NT seq 2109 nt +upstreamnt +downstreamnt
atgaattctctgtttgccagtacggcccgtgggctggaagagctgttaaaaactgaactg
gaaaatctgggggccgttgaatgccaggtggttcagggtggggtccatttcaagggcgac
acacggcttgtttaccagagcctgatgtggagccgcctggcctcgcgtattatgttgccg
ctgggcgagtgtaaggtttacagcgatttagacctctatctcggtgttcaggcgatcaac
tggacagagatgtttaatcctggcgcgaccttcgctgtccacttcagtggtttgaatgac
accatccgcaacagtcagtacggcgcgatgaaagtgaaagacgcgatcgtcgatgctttc
acacggaaaaatctgccgcgtccaaatgttgatcgcgatgcgccggatatccgcgttaac
gtctggctgcataaagaaaccgccagtatcgctcttgatctgagtggtgatggtttacat
ctgcgtggctatcgcgatcgtgctggtattgcgccgatcaaagaaaccctggcagccgct
attgtgatgcgatccggctggcagtcaggaacaccgctgctcgatccgatgtgtggttcc
ggtacgttgctgattgaagcggcgatgctggcgaccgatcgcgcaccaggcttgcaccgt
gggcgttggggctttagcggctgggcgcagcatgatgaagctatctggcaggaagtgaaa
gcggaagcgcaaactcgcgcccgtaaaggcctagctgagtatagctctcatttttacggt
tcggacagcgacgcacgggtgattcaacgtgcgcgcactaacgcccgtcttgcggggatt
ggtgaactgatcacctttgaggtgaaagatgtcgcgcaactgaccaatccgctgccgaaa
gggccgtacggtacagtgttgagcaacccgccatacggtgaacgtctggacagcgaaccg
gcgctgattgcgctgcatagtctgctgggccgaatcatgaaaaaccagttcggtggctgg
aatctctctttgtttagtgcctcgccggatctgctaagctgcctgcagctgcgtgcagac
aaacagtacaaggcgaaaaacggcccgctggactgcgtacagaaaaattaccacgttgcc
gaaagcacaccagacagtaaaccggcaatggtagcggaagattacgccaaccgcctgcgt
aagaacctcaaaaaattcgagaagtgggcacgccaggaagggattgaatgttaccgcctg
tatgacgccgatctgccggaatataacgttgccgttgaccgttatgccgactgggtggtg
gtgcaggagtatgcgccgccaaaaactattgatgcgcacaaagcgcgtcagcgtctgttc
gatattatcgctgcaaccatttcggtactggggattgcgccaaacaaactggtgctgaaa
acccgtgaacgccataagggcaaaaaccagtaccagaaactgggcgagaagggcgagttt
cttgaagttaccgaatataacgctcacttgtgggtgaacctgacggattatctcgatact
ggtctgttcctcgatcaccgtatcgcccgccgtatgctcggtcagatgagcaaaggcaaa
gatttcctcaacctgttttcttataccggcagcgccaccgtgcatgcgggattaggcggt
gcacgcagcaccaccaccgtggatatgtcgcgtacttatctggaatgggcagaacgcaac
ctgcgtctgaatggcctgactaggcgtgcgcatcgcctgattcaggccgattgcctggcg
tggctgcgtgaggcaaatgaacagttcgatctgatctttatcgatccgccaaccttctct
aactcaaaacgaatggaagatgcgtttgatgttcagcgcgatcatctggcgctgatgaaa
gatttgaaacgtctgctgcgtgcaggtgggacgatcatgttctcgaacaacaaacgtggc
ttccgtatggatctcgacggcctggcaaaactgggactgaaagcacaagaaattacgcaa
aaaacgctctcccaggatttcgcccgtaaccgccagatccacaactgctggctgattacc
gcagcctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (2)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (26)   

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