KEGG   Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_00122
Entry
SPHFLASMR4Y_00122 CDS       T04949                                 
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
  KO
K00140  malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
Organism
sfla  Sphingorhabdus sp. SMR4y
Pathway
sfla00280  Valine, leucine and isoleucine degradation
sfla00410  beta-Alanine metabolism
sfla00562  Inositol phosphate metabolism
sfla00640  Propanoate metabolism
sfla01100  Metabolic pathways
sfla01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:sfla00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00640 Propanoate metabolism
    SPHFLASMR4Y_00122 (gabD)
   00562 Inositol phosphate metabolism
    SPHFLASMR4Y_00122 (gabD)
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    SPHFLASMR4Y_00122 (gabD)
  09106 Metabolism of other amino acids
   00410 beta-Alanine metabolism
    SPHFLASMR4Y_00122 (gabD)
Enzymes [BR:sfla01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.18  malonate-semialdehyde dehydrogenase (acetylating)
     SPHFLASMR4Y_00122 (gabD)
    1.2.1.27  methylmalonate-semialdehyde dehydrogenase (CoA-acylating)
     SPHFLASMR4Y_00122 (gabD)
SSDB
Motif
Pfam: Aldedh LuxC DUF3197
Other DBs
NCBI-ProteinID: ASK86915
UniProt: A0A220W276
Position
140721..142223
AA seq 500 aa
MRTVTHVLASGGNAAAVRQSDIFDPNNGGIQGKVDLGDAAVLDKAVDAALAAQPAWAATN
PQRRARVMFKFKELVEANMDELAHMLSIEHGKVIADSKGDIQRGLEVIEFCCGIPHVLKG
EYTQGAGPGIDVYSMRQPIGIGAGITPFNFPAMIPMWMFGPAIATGNAFILKPSERDPSV
PVRLTELMLEAGLPEGILQCLHGDKEMVDAILDHPAIGGVSFVGSSDIAHYVYQRGVAAG
KRVQAMGGAKNHGIVLPDADLDQVVNDLSGAAFGSAGERCMALPVVVPVGEDTADRLREK
MIPAMEALRVGVSTDEEAHYGPVVNPAHKQRVENWIQTGVDEGAELVVDGRGFSLQGHED
GCFIGPSLFDRVTPDMESYKEEIFGPVLQIVRAKNFEEALALPSQHQYGNGVAIFTRNGH
AAREFASRVNVGMVGINVPIPVPVAYHSFGGWKRSAFGDTNQHGMEGVKFWTKVKTITQR
WPDGTADGGNKDAFVIPTMG
NT seq 1503 nt   +upstreamnt  +downstreamnt
atgcgcactgttacccatgtcttggcttccggaggaaacgcagcagcggtccgccagagc
gatattttcgatcccaataacggcggcatccagggtaaggtggacctcggcgatgcagca
gtgctcgacaaggcggtcgatgcggctctcgcggcgcagccggcctgggcagccaccaac
ccgcagcggcgggcgcgggtgatgttcaagttcaaggaactggtcgaggccaatatggac
gagctcgcccatatgctctcgatcgagcatggcaaggtgatcgcggactccaagggcgat
atccagcgtggtctggaagtcatcgaattctgctgcggcatcccgcatgtcctgaagggc
gaatatacccagggcgcaggtcccggcatcgacgtttactctatgcgccagccgatcggc
atcggcgccggcatcacccctttcaacttcccggcgatgatcccgatgtggatgttcggc
ccggcgattgcgaccggcaacgcgttcatcctgaaaccgtccgaacgtgatccgtcggtt
ccggtgcggctgaccgaactgatgctcgaagcgggtcttccggaaggcattttgcaatgt
ctgcacggcgacaaggaaatggtcgatgccattctcgatcatccggccattggcggcgtc
agcttcgtcggatcttccgacatcgcccattatgtctaccagcgcggtgttgctgcgggc
aagcgcgtccaggccatgggtggcgcgaaaaaccacggcatcgtgctgccggacgcggat
ctcgatcaggtcgtgaacgatctgtccggcgctgccttcggctcggccggcgaacgctgt
atggcgctgccggtggttgtaccggtgggcgaagacaccgccgaccgtctgcgcgaaaaa
atgatcccggcaatggaagccttgcgtgtcggcgtttcgaccgacgaggaagcccattat
ggtccggtcgtcaatccggctcacaagcagcgggtcgagaactggatccagaccggcgtt
gacgaaggcgccgaactggtcgtcgacggccgcggcttctcgttgcaggggcacgaagac
ggctgtttcatcggcccgtccttgttcgaccgtgtcaccccggacatggaaagctacaag
gaagaaattttcggtcccgtgctgcagatcgtccgtgccaagaatttcgaggaagcgctc
gcgctgccaagccagcaccaatatggcaatggcgtcgcgatcttcacccgcaacggccac
gccgcgcgtgaatttgccagccgcgtcaatgtcggcatggtcggcatcaacgtgccgatc
ccggtaccggttgcctatcacagcttcggcggctggaagcggtcggccttcggcgacacg
aaccagcacggcatggaaggcgtgaaattctggaccaaggtcaagaccatcacccagcgc
tggcctgatggcacggcggatggcggcaacaaggatgccttcgtcatcccgacaatgggg
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (12)   
   KEGG COMPOUND (12)   
Chemical reaction (6)   
   KEGG ENZYME (2)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

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