KEGG   Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_00949
Entry
SPHFLASMR4Y_00949 CDS       T04949                                 
Symbol
gltD
Name
(GenBank) glutamate synthase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sfla  Sphingorhabdus sp. SMR4y
Pathway
sfla00010  Glycolysis / Gluconeogenesis
sfla00020  Citrate cycle (TCA cycle)
sfla00260  Glycine, serine and threonine metabolism
sfla00280  Valine, leucine and isoleucine degradation
sfla00310  Lysine degradation
sfla00380  Tryptophan metabolism
sfla00620  Pyruvate metabolism
sfla00630  Glyoxylate and dicarboxylate metabolism
sfla00640  Propanoate metabolism
sfla00785  Lipoic acid metabolism
sfla01100  Metabolic pathways
sfla01110  Biosynthesis of secondary metabolites
sfla01120  Microbial metabolism in diverse environments
sfla01200  Carbon metabolism
sfla01210  2-Oxocarboxylic acid metabolism
sfla01240  Biosynthesis of cofactors
Module
sfla_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sfla_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sfla_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sfla_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sfla00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SPHFLASMR4Y_00949 (gltD)
   00020 Citrate cycle (TCA cycle)
    SPHFLASMR4Y_00949 (gltD)
   00620 Pyruvate metabolism
    SPHFLASMR4Y_00949 (gltD)
   00630 Glyoxylate and dicarboxylate metabolism
    SPHFLASMR4Y_00949 (gltD)
   00640 Propanoate metabolism
    SPHFLASMR4Y_00949 (gltD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SPHFLASMR4Y_00949 (gltD)
   00280 Valine, leucine and isoleucine degradation
    SPHFLASMR4Y_00949 (gltD)
   00310 Lysine degradation
    SPHFLASMR4Y_00949 (gltD)
   00380 Tryptophan metabolism
    SPHFLASMR4Y_00949 (gltD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SPHFLASMR4Y_00949 (gltD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sfla04147]
    SPHFLASMR4Y_00949 (gltD)
Enzymes [BR:sfla01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SPHFLASMR4Y_00949 (gltD)
Exosome [BR:sfla04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SPHFLASMR4Y_00949 (gltD)
SSDB
Motif
Pfam: Pyr_redox_2 GIDA Pyr_redox_dim NAD_binding_8 Pyr_redox_3 Pyr_redox FAD_oxidored DAO HI0933_like AlaDh_PNT_C FAD_binding_3 3HCDH_N Lys_Orn_oxgnase FAD_binding_2 Lycopene_cycl 2-Hacid_dh_C Thi4 XdhC_C UDPG_MGDP_dh_N NAD_binding_9 ThiF TrkA_N NAD_Gly3P_dh_N ApbA adh_short_C2 DFP
Other DBs
NCBI-ProteinID: ASK87724
UniProt: A0A220W4J7
Position
complement(989351..990763)
AA seq 470 aa
MASILRCDVAVIGAGTAGLAAERAARANGASTLLIDPHFNGTTCANVGCMPSKLLIAASH
AAHAARSTDIFGIRVPTVDIDGQAVMQRVRDERDRFARLTRESIADIPARVRLRGRARFI
ASNSLELDDGRQVEARRIIIATGSSPFIPDQFAGLGKCLLTNETIFELEHLPVRLAVVGS
GPIGLELAQAMARLGVEVTLFDQNERLGGIRCDKVHDSLKQIIETDLVLKLGVDIDASPT
DAGAHLSWSGGESGQSDFDHVLVATGRPPNLDSLDLAAAGLELDDHGVPVHDRNTMQCGD
SRIFLAGDVADDLPLLHEASQDGAIAGRNAVAYPASMQADRFPHFSITFTSPPVARIGQS
EEDGVITRTADYSDQGRARVEGRNKGVLTLYAAAPDGRLIGADLCTPDSEHLAHILTWAI
QQGQTASQLLEMPYYHPTIEEGLKQALRTICAATPIDLPEDQDRGVPSGA
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggccagtatcctgcgatgcgacgttgcggtcatcggcgccggcaccgccggtctggcg
gccgagcgggctgcccgcgccaacggggccagcaccttgctgatcgatccccatttcaac
gggacaacctgtgccaatgtcggctgcatgccttcaaagctgctgatcgcggcttcgcat
gccgcgcatgccgcgcgctccaccgacatctttggcatcagggttccgactgtcgacatt
gatggacaggccgtgatgcaacgcgtgcgtgacgaacgcgaccgattcgcccggctgacc
cgcgaaagcatcgccgatatcccggcccgggtccgcttgcgggggcgggcccggttcatc
gcgtccaatagcctggaactggacgatgggcggcaagtcgaagcccggcgcatcatcatc
gccacgggttccagtcccttcattcccgaccagtttgcgggactgggaaaatgcctgctg
accaacgagaccatattcgaactggagcatcttcccgtccgcctcgcggtggtcggttcc
ggccccatcggtctcgaactggcgcaggccatggcgcgcctcggtgtcgaagtcaccctg
ttcgatcagaatgagaggctcggcggtatccgctgcgacaaggtgcatgattcgctgaag
cagatcatcgagaccgatcttgttctgaaactgggcgtggacattgacgccagcccgacg
gacgccggcgcacatctttcctggagcggcggggaatcggggcagtcggatttcgatcat
gttctggtcgcgaccggacggccgccgaatctcgacagccttgatcttgcggctgccgga
ctggaactcgacgatcatggcgtgccggtccatgaccgcaatacgatgcaatgcggtgac
agcaggatatttctggccggtgatgtcgccgacgatctgcctttgctgcacgaggcctcg
caggatggcgcgatagccgggcgcaatgccgtggcctatccggcttcgatgcaggcggat
cgctttccgcatttcagcatcaccttcaccagcccgcccgtggcacggatcggccagtcg
gaagaggatggcgtgatcacccgcactgccgattatagcgatcagggcagggcgcgcgtg
gaaggccgcaacaagggcgtcctcacgctgtatgcggccgcaccggatggccggctgatc
ggcgcggacctgtgcacgcccgacagcgaacatcttgcgcacatattgacctgggcgatc
cagcagggacagaccgccagccagttgctggaaatgccatattaccatccgacgatcgag
gagggtctgaaacaggcgctgaggacgatttgcgcggcgacaccgatcgacttgccggaa
gaccaggatcgcggcgtcccgtcgggcgcttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (95)   

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