KEGG   Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_03305
Entry
SPHFLASMR4Y_03305 CDS       T04949                                 
Symbol
dksA
Name
(GenBank) RNA polymerase-binding transcription factor DksA
  KO
K06204  RNA polymerase-binding transcription factor
Organism
sfla  Sphingorhabdus sp. SMR4y
Brite
KEGG Orthology (KO) [BR:sfla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sfla03000]
    SPHFLASMR4Y_03305 (dksA)
   03021 Transcription machinery [BR:sfla03021]
    SPHFLASMR4Y_03305 (dksA)
   03009 Ribosome biogenesis [BR:sfla03009]
    SPHFLASMR4Y_03305 (dksA)
Transcription factors [BR:sfla03000]
 Prokaryotic type
  Other transcription factors
   Others
    SPHFLASMR4Y_03305 (dksA)
Transcription machinery [BR:sfla03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription elongation factors
     SPHFLASMR4Y_03305 (dksA)
Ribosome biogenesis [BR:sfla03009]
 Prokaryotic type
  rRNA transcription factors
   SPHFLASMR4Y_03305 (dksA)
SSDB
Motif
Pfam: zf-dskA_traR V_ATPase_I Phage_Nu1
Other DBs
NCBI-ProteinID: ASK90031
UniProt: A0A220WB50
Position
complement(3367081..3367428)
AA seq 115 aa
MADELLPAHIEILHERLRARQAELKALDAEAASWRNTVELDQQSVGRLSRMDAMQQQEMA
QAEARRRTSDLARIEMALKRIRQNEYGWCAECGDPIAFRRLEIDPAAALCIGCAR
NT seq 348 nt   +upstreamnt  +downstreamnt
gtggcggacgagctattaccggcccacatcgaaattctgcacgagcgcctgcgcgcacgg
caggctgaactgaaagcactggacgcggaagcggcaagctggcgcaatacagtcgagctc
gaccagcaaagcgtcggccgcctgtcccggatggacgcgatgcaacagcaggaaatggcc
caggccgaagcacgccggcggaccagtgatctggcccggattgaaatggcgctgaaacgt
atcagacagaatgaatatggctggtgcgccgagtgcggagatccgattgcctttcgccga
ctggaaatcgatccggctgcggccctgtgcattggctgcgcgcgctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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