KEGG   Scleropages formosus (Asian bonytongue): 108919930
Entry
108919930         CDS       T04919                                 
Name
(RefSeq) UV excision repair protein RAD23 homolog A-like isoform X1
  KO
K10839  UV excision repair protein RAD23
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm03420  Nucleotide excision repair
sfm04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108919930
  09124 Replication and repair
   03420 Nucleotide excision repair
    108919930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:sfm03051]
    108919930
   03400 DNA repair and recombination proteins [BR:sfm03400]
    108919930
Proteasome [BR:sfm03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    108919930
DNA repair and recombination proteins [BR:sfm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      108919930
SSDB
Motif
Pfam: XPC-binding UBA ubiquitin Rad60-SLD UBA_3 Crinkler Rad60-SLD_2 Dsc3_N Ubiquitin_2 CUE UBA_2 Ubiquitin_4
Other DBs
NCBI-GeneID: 108919930
NCBI-ProteinID: XP_018583859
Position
9:complement(268011..279351)
AA seq 466 aa
MLTITLKTLQQQTFKIEIDEELTVRALKEKIETEKGKDAYPASGQKLIYAGKILNDDIPL
KEYKIDEKNFVVVMVTKPKSTPQVPAQPVPSPPFVSTPLPIVAPSAPAPAPAPAPAPAPA
PAPAPAPDPGPDPDPTPTPAIAATIALPPAPAPAPAPVLTPAPVPASAPSEEQHAPQTEP
ATSIPPTTMETSTEAAASSVPSTPTVVEAKPQEEPREEPLATSPTLISSSIAEELNLLEE
AASILVTGQAYENLVAEIMSMGYEREQVIAALRASYNNPDRAVEYLLTGIPVEADIPLRE
STHPPPTANPSPSAAERPQPPPAGSTGAVSSSPAQSSSNPLEFLRNQPQFQQMRQIIQQN
PALLPALLQQLGRDNPQLLQQITQHQERFVQMLNEPLGGDLGGEGAEGQRVTQANYIQVT
PQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDDE
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgttgactattacgctcaaaacgctccagcagcagacctttaaaatagagatagacgag
gagctcacggtaagagccttgaaggagaaaattgaaacagaaaaggggaaggatgcatat
ccagcttctggacagaagctcatctatgcaggtaaaatcttaaatgatgacataccccta
aaggagtacaaaatagatgagaagaattttgttgtggtgatggtaacaaagccaaaatca
acaccacaggttccagctcagcctgtaccttctccaccttttgttagcaccccattgccc
attgttgctccttcagcccctgcccctgcccctgcccctgccccggcccctgcccctgcc
ccagccccagccccagcccctgaccctggccctgaccctgaccctacccctacccctgct
atagcagctaccattgcacttcccccagcaccagcaccagcccctgcccctgtccttaca
cctgcacctgtcccagcctccgcaccctcagaggaacagcacgctcctcagacagagcct
gccacctccataccccccacaaccatggaaacaagcacagaagcagcagcctccagcgtc
cccagtactcctacggtggtggaagccaaacctcaggaagaaccacgagaagagccactg
gctacctctccgaccctcatttcttccagcattgctgaagaattgaaccttttagaagaa
gctgcatcaatactggtgacagggcaggcgtatgagaatttggttgcagaaataatgtca
atgggctatgaaagggagcaggtgatcgcagcattgcgagccagttacaacaacccggac
agagcggtggaatatcttctcacgggtattcctgtggaagcggatattccgctccgggaa
tcgacccaccccccaccgacagcaaaccccagcccttcagctgcagagagacctcagcct
cccccagcaggaagcacaggcgctgtgtcctcgtccccagcgcagtcctccagcaacccc
ctggagtttttgaggaaccaaccacagttccagcagatgcgacagatcatccagcagaac
ccggcgctgctgcctgctttgctccagcagttgggcagagacaacccccagctgctccaa
caaatcacccagcatcaagagcggtttgtgcagatgctgaacgaaccccttggaggagac
ctgggaggggaaggagctgaaggacagagggtaacacaggcgaactacatccaggtcaca
ccgcaggaaaaagaggcaatcgaaaggctaaaagccttgggatttccggaaggactggtc
attcaagcctattttgcctgtgaaaagaacgagaatcttgcggcaaacttcctgcttcag
cagaattttgacgacgagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (12)   
   Pfam (12)   
All databases (65)   

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