KEGG   Scleropages formosus (Asian bonytongue): 108923678
Entry
108923678         CDS       T04919                                 
Name
(RefSeq) cytoplasmic dynein 1 light intermediate chain 1-like isoform X1
  KO
K10416  dynein cytoplasmic 1 light intermediate chain
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm04145  Phagosome
sfm04814  Motor proteins
sfm05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108923678
  09142 Cell motility
   04814 Motor proteins
    108923678
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108923678
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sfm04131]
    108923678
   03036 Chromosome and associated proteins [BR:sfm03036]
    108923678
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sfm04812]
    108923678
Membrane trafficking [BR:sfm04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab4 associated proteins
    108923678
Chromosome and associated proteins [BR:sfm03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   SAC (spindle assembly checkpoint) factors
    Motor proteins
     Dynein complex
      108923678
Cytoskeleton proteins [BR:sfm04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dyneins
     108923678
SSDB
Motif
Pfam: DLIC Roc ABC_tran GTP_EFTU AAA_16 RecO_C PduV-EutP AAA_29 NACHT
Other DBs
NCBI-GeneID: 108923678
NCBI-ProteinID: XP_029115701
Position
18:complement(957173..965177)
AA seq 504 aa
MASRGRSASSWCGTGAFTEGETSGGDEDGQNLWSSILSEVSTRSRSKLPAGKNVLVLGDD
GSGKTSLMAKLQGVEDYMKGRGLEYLYFSVHDEDVDDHARCNAWVLDGDLYHKGLQKFAV
TADSLMDSAALLVVDISRPWTALESLRKWASVLREFIDKLRLPPEAMREMEQKLARRFQE
YTEPGSDLSASHQRRNPTVTDAQEDGVMLPLSDGTLTHNLGIPVVVVCTKCDAISSLEKE
HDYRDEHFDFIQSHIRRFCLQYGAALLYTSVKENKNVDVLYKYLLHSLYGFPFALPPQVV
EKDAVFVPSGWDNEKKIAILHENFQTLKADDGFEDVIVKPPVRKFVHEKEVVAEDNQVFL
VKLQSLLAKQPAVSGGRPVDASNRGPGGSPRTTNRSAPGNVPNVMPVQTGTKKIDPTVKG
GQTSEGVLANFFNSLLSKKTGSPGPAGSTPGGGGATPGTAKKSGSKLGLTEAQAQLDRIS
SKSDLDTTFLSPTSPTAPAEGGES
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggcgtctcgcggcagaagcgcatcctcatggtgcggtaccggcgcgttcacagagggg
gagacgagtggcggggacgaggacggacagaacctgtggtcctccatcctgagcgaggtg
tccacgcgctccaggtccaagttacccgccgggaagaatgtgctcgttttaggggacgac
ggctctggcaaaacctctttgatggccaaactccaaggagtggaggactacatgaaggga
cggggactcgagtacctttacttcagcgttcacgatgaggatgtggacgaccacgcgagg
tgtaacgcctgggtgctggacggcgacctgtaccacaaagggctgcagaagtttgcggtg
acagcggacagtttgatggacagcgccgccctgctggtagtggacatttcgcgaccgtgg
acagccctggagtcgctgcgcaagtgggcgagcgttttgcgggagttcatcgacaagctg
aggctccctccggaggcgatgagggagatggagcagaaactggcgcgccggttccaggaa
tacacggagccgggcagcgacctcagcgcgtcccaccagcggaggaaccccaccgtgacc
gacgcccaggaggacggcgtgatgctgcccttgagcgacggcacgctcacgcacaacctg
ggcatcccggtcgtggttgtgtgcacgaagtgcgacgccatcagcagcctggagaaggag
cacgattaccgggacgagcactttgacttcatccagtcgcacatccgccgcttctgcctg
cagtatggcgccgccctgctgtacacgtcggtgaaggagaacaaaaatgtggacgtgctc
tacaagtacctgctccacagcttgtacggcttccctttcgctctgccgccgcaagtcgtg
gagaaggacgcggtgtttgtcccgtccgggtgggacaacgagaagaagatcgcgatcctg
cacgagaacttccagacactgaaggcggacgacggcttcgaagatgtcatcgtgaagccg
cccgtgcggaagtttgtgcacgagaaggaggttgtggccgaggacaaccaggtgtttctc
gtgaagctacagtccctgctggcgaagcagcccgccgtgtccggaggacgtccagtggac
gcctccaaccgaggacccggcggctcgccgcgcaccaccaaccgctcggcgcctggcaac
gtacccaacgtcatgcccgtgcaaacaggtaccaagaagatcgatcccacggtgaaaggg
gggcagaccagcgagggcgtcctggccaactttttcaacagtctgctcagcaagaagacg
ggctcccccgggcctgcgggcagcacacctgggggagggggcgccacccctggcacagcc
aagaaatcagggtcgaagctcggcttgacggaagcgcaggcccaactggaccgcatttcc
agcaagtcggacctggatacaaccttcctctcccccacttcccccacggcaccggctgag
gggggcgagtcctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (9)   
   Pfam (9)   
All databases (41)   

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