KEGG   Shigella flexneri 2003036: SFy_0274
Entry
SFy_0274          CDS       T03267                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
sfn  Shigella flexneri 2003036
Pathway
sfn03030  DNA replication
sfn03430  Mismatch repair
sfn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sfn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SFy_0274
   03430 Mismatch repair
    SFy_0274
   03440 Homologous recombination
    SFy_0274
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sfn03032]
    SFy_0274
   03400 DNA repair and recombination proteins [BR:sfn03400]
    SFy_0274
Enzymes [BR:sfn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SFy_0274
DNA replication proteins [BR:sfn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SFy_0274
DNA repair and recombination proteins [BR:sfn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SFy_0274
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 DUF5817
Other DBs
NCBI-ProteinID: AIL34157
Position
228457..229188
AA seq 243 aa
MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDP
EAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPK
TNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLAMTG
GQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFATDEELAAHEARLDLVQKKGGSCL
WRA
NT seq 732 nt   +upstreamnt  +downstreamnt
atgagcactgcaattacacgccagatcgttctcgataccgaaaccaccggtatgaaccag
attggtgcacactatgaaggccacaagatcattgagattggtgctgttgaagtagtgaac
cgtcgcctgacgggcaataacttccatgtttatctcaaacccgatcggctggtggatccg
gaagcctttggcgtacatggtattgctgatgaatttttgctcgataagcccacgtttgcc
gaagtagccgatgagtttatggactatatccgcggcgcggagttggtgatccataacgca
gcgttcgatataggctttatggactacgagttttcgttgcttaagcgcgatattccgaag
accaataccttctgtaaggtcaccgatagccttgcggtggcgaggaaaatgtttcccggt
aaacgcaacagcctcgatgcgctatgtgcccgctacgaaatagataacagtaaacgaacg
ctgcacggggcattactcgatgcccagatccttgcggaagtttatctggcgatgaccggt
ggtcaaacgtcgatggcttttgcgatggaaggagagacacagcagcaacaaggtgaagca
acaattcagcgcattgtacgtcaggcaagtaagttacgcgttgtttttgcgacagatgaa
gagctggcagcacatgaagcccgtctcgatctggtgcagaaaaaaggcggaagctgcctc
tggcgggcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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