KEGG   Shewanella frigidimarina: Sfri_2181
Entry
Sfri_2181         CDS       T00395                                 
Name
(GenBank) Holliday junction DNA helicase RuvA
  KO
K03550  holliday junction DNA helicase RuvA
Organism
sfr  Shewanella frigidimarina
Pathway
sfr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sfr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Sfri_2181
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfr03400]
    Sfri_2181
DNA repair and recombination proteins [BR:sfr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Sfri_2181
    RecFOR pathway proteins
     Sfri_2181
SSDB
Motif
Pfam: RuvA_N HHH_5 RuvA_C HHH RecR_HhH IMS_HHH HHH_3 Reovirus_L2_MT2 HHH_8
Other DBs
NCBI-ProteinID: ABI72027
UniProt: Q081N8
Position
complement(2607789..2608406)
AA seq 205 aa
MIGRLSGILVEKQAPEVVLDVNGVGYELQVPMTSFYELPALNQAAMLFTHFVVREDAQLL
YGFITKQERALFRLLIKTNGVGPKLALTILSGMTASEFVSCVERDDIATLVKLPGVGKKT
AERLVIEMRDKLKSLLEASAGSEREFMLQSNYTPAAAVDSAEEDAISALLSLGYKPAQAS
KSVSAAFKEGMSSETLIKAALKSML
NT seq 618 nt   +upstreamnt  +downstreamnt
atgataggtcgtctaagcggaatattagtagaaaagcaagcgcctgaagtggtgcttgat
gtcaatggcgtcggttatgagttacaagtgccgatgaccagcttttatgaattaccagcg
ttaaaccaagctgctatgttatttactcattttgtggtgcgtgaagatgctcagctactt
tacggttttatcactaaacaagaacgtgcattattccgtttattgattaaaaccaatggc
gttgggcctaaactggcattaactattttgtcgggtatgacagcgtctgagttcgtgtca
tgtgttgaacgtgatgatattgcgactttagtaaaactgcctggcgttggtaagaaaacc
gcagagcgtttggtgattgaaatgcgtgataagcttaaaagcttacttgaagcttctgca
ggttcagagcgcgagtttatgctgcaaagtaattatactccagcagcggctgttgatagt
gcagaagaagatgccatttcagctttattgtcattaggttataaacctgctcaggccagt
aagtcagtttctgcggcttttaaagaaggcatgagttcagaaacgctaattaaagctgca
ttaaaatcaatgctataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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