KEGG   Shewanella frigidimarina: Sfri_2550
Entry
Sfri_2550         CDS       T00395                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
sfr  Shewanella frigidimarina
Pathway
sfr00470  D-Amino acid metabolism
sfr00550  Peptidoglycan biosynthesis
sfr01100  Metabolic pathways
sfr01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:sfr00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Sfri_2550
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Sfri_2550
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Sfri_2550
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sfr01011]
    Sfri_2550
Enzymes [BR:sfr01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Sfri_2550
Peptidoglycan biosynthesis and degradation proteins [BR:sfr01011]
 Precursor biosynthesis
  Amino acid ligase
   Sfri_2550
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp CPSase_L_D2 RimK
Other DBs
NCBI-ProteinID: ABI72392
UniProt: Q080C3
Position
3055342..3056352
AA seq 336 aa
MPKINLLLLCGGGGAEHDISLMSARFFESSLAKSDKFSVLKLVLDKHGHYHTEDGKLCDL
TNRREIRFEDNSTPAWSVDYVIPCIHGFPGETGDIQSYFNLIQLPYFGCESEASSNCFNK
ITAKMWFSALGVPNTPYIFLHQLDDDAIKQTETAFDNWGSVFVKAASQGSSVGCYKVDVK
ANIANVLKDAFSYAPYVVVEQTIHARELEVAVYQYQGEVVATLPGEIICDSNTFYSFDEK
YATNSKARTDVVADNLSPEISQLIRDYAVKAFKGMKLRHLSRIDFFLTADNQILLNEINT
FPGLTPISMFPKMLQNHGHNFTEYLIDVIGQQVDLT
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgccaaagattaatctgctgttattgtgcggcggtggcggtgcagagcacgatatttcg
ttaatgtctgcacgtttttttgagtcatcactggcaaagtcagataaattttcggtactt
aagttagtactcgataaacatggtcattaccacactgaagacggtaaattatgcgacctg
actaatcgtcgtgaaattcgttttgaagataacagtacaccagcatggtcagttgattat
gtgatcccgtgtattcatggtttcccgggtgaaaccggcgatattcaatcatactttaac
ttaatacaactgccctactttggttgtgaatctgaagcctcaagtaattgttttaacaaa
atcaccgctaaaatgtggttttcagctttaggcgtcccaaacacgccttacatcttttta
catcaactagatgatgatgcaatcaagcaaactgaaacggcatttgataattggggatct
gttttcgttaaagcagcatcacaaggatcgtctgtgggatgctataaagtcgatgtgaaa
gccaatatcgctaacgtacttaaggatgcattcagttatgcaccttacgttgtggttgag
caaaccatccatgcgcgtgaattagaggtcgccgtatatcaataccagggtgaagtggtc
gctaccttaccgggtgagattatttgcgacagtaataccttttattcatttgatgaaaag
tacgctacaaatagtaaggctcgcaccgacgttgttgctgataacctaagcccagagatc
agtcagctgatccgtgattacgcggtaaaagcctttaaagggatgaagttacgtcacttg
tcgcgcatcgatttctttttaactgccgataaccaaattctcttgaatgaaattaacacc
ttccctgggttaacgcctatttcaatgttcccgaaaatgttgcaaaaccatggacataat
ttcactgaatatttaattgatgtgattggacaacaggttgatttaacgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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