KEGG   Shewanella frigidimarina: Sfri_3097
Entry
Sfri_3097         CDS       T00395                                 
Name
(GenBank) AMP-dependent synthetase and ligase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
sfr  Shewanella frigidimarina
Pathway
sfr00061  Fatty acid biosynthesis
sfr00071  Fatty acid degradation
sfr01100  Metabolic pathways
sfr01212  Fatty acid metabolism
sfr02024  Quorum sensing
Module
sfr_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:sfr00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    Sfri_3097
   00071 Fatty acid degradation
    Sfri_3097
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Sfri_3097
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:sfr01004]
    Sfri_3097
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sfr04147]
    Sfri_3097
Enzymes [BR:sfr01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     Sfri_3097
Lipid biosynthesis proteins [BR:sfr01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   Sfri_3097
Exosome [BR:sfr04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   Sfri_3097
  Exosomal proteins of breast cancer cells
   Sfri_3097
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: ABI72934
UniProt: Q07YI0
Position
3703662..3705260
AA seq 532 aa
MAYDADSVLDLHQYTSIVDLIEKACDKYADNVAYACLGKSTTFREIEQGSRDFASYLQHS
TSLQPGDRVAIQLPNITQFVIAAYGVIRAGMVLVNTNPMYTERELIHQFNDSGAKALVVL
SDLLPTLTNVIDKTTVELVISTHAMDLIQPQPQPETPFNKVAFTSVLTEGAKHPYQAIKP
NHDDLIALQYTGGTTGLSKGAMLNHGNLLANSGQVKSRIASTMTEGHDVFVAPLPIYHIY
AFMVNLVLYFESGSCSVLIPNPRDIAGLINTMKAYPFTGFAGLNTLFVGLCHQPEFKALD
FSKMKITISGGTALTSAAANLWQQTTQCMISEGYGLSETSPVVSLNAPGHQRLGTIGKPV
LGTEVHVLDMDDNEVAIGQAGELAVRGPQVMQGYWNKPQETANVMTKDGFFKTGDIGIAS
EDGYHTIVDRKKDMIIVSGFNVYPNEVEDVLSTNELVLECAVVGVEDERSGEAVKAVIVL
KQPPADIEAVKQAINDYCRSQLTAYKVPRIIEFTEQLPKSAVGKILRRELRK
NT seq 1599 nt   +upstreamnt  +downstreamnt
atggcttatgatgcagattcagtacttgatttacaccaatacacatccatagttgatttg
atcgaaaaagcctgtgacaagtatgctgataatgttgcatatgcatgtcttgggaaaagc
actacctttcgcgaaatagaacaaggctcgcgcgattttgccagttatttgcaacatagc
acttcattgcaaccaggcgacagagtagcgatacaattgcctaatattactcagtttgtg
attgcggcttatggggtaattcgagcaggtatggtgctagtcaataccaatccgatgtac
acggaacgtgaacttattcatcaatttaacgactcaggtgcaaaagccttagtcgtattg
tcggatttactacctacattaactaacgtgatcgacaaaacaacagtagagctggtgatt
tcgacccacgcaatggatcttatccaaccgcaacctcagcctgaaaccccttttaataaa
gtggcatttacctctgtgctcactgaaggtgctaagcatccttatcaagcgataaaacct
aaccatgatgatttaattgctctgcaatacaccggcggcacaaccggtttatcgaaaggc
gctatgctcaatcatggcaaccttttggctaattctggtcaagtaaaatcacgaattgct
agcaccatgaccgaagggcatgatgtgtttgtcgcgccattaccgatttaccatatctat
gcatttatggttaatttggtgctgtattttgaatcaggtagctgttcagtattaattccc
aatcctcgtgatattgcagggctaatcaataccatgaaagcctatccatttactggcttt
gcgggtttaaacactctatttgttggcttatgtcatcagccagaatttaaagccttagat
ttcagtaaaatgaaaataaccatttcgggtggtactgcattaacgagtgcagcagctaac
ttatggcaacaaaccacccaatgtatgatttcagaaggttatggtttgtctgaaacatct
cctgttgtcagccttaatgcaccagggcatcaacgcctcggtactattggcaaacctgta
ttgggcactgaagttcatgtactcgatatggatgataatgaagtggctatcggtcaagct
ggcgaactcgcagtgcgcggtccgcaagttatgcaagggtattggaataaaccacaagaa
accgctaacgtcatgacaaaagacggattctttaaaactggcgatattggcattgctagc
gaagatggttatcacaccattgttgatcgtaaaaaagacatgattattgtttctggtttt
aacgtctatcctaatgaagttgaagacgtactttcaactaatgagttagttttagagtgt
gctgtcgtcggggttgaagatgaacgatctggcgaagcagtaaaagccgtgattgtatta
aaacagccgccagcggatatcgaggcagtcaaacaggcgattaatgattactgccgcagc
caactgactgcgtataaagtgccacgcattattgagtttactgaacagttaccgaaaagt
gctgtagggaaaattttgcgtcgagaactacgtaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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