KEGG   Shewanella frigidimarina: Sfri_3325
Entry
Sfri_3325         CDS       T00395                                 
Name
(GenBank) DNA topoisomerase IV subunit A
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
sfr  Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:sfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sfr03032]
    Sfri_3325
   03036 Chromosome and associated proteins [BR:sfr03036]
    Sfri_3325
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sfr02048]
    Sfri_3325
Enzymes [BR:sfr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Sfri_3325
DNA replication proteins [BR:sfr03032]
 Prokaryotic type
  DNA Topoisomerases
   Sfri_3325
Chromosome and associated proteins [BR:sfr03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    Sfri_3325
Prokaryotic defense system [BR:sfr02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    Sfri_3325
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C
Other DBs
NCBI-ProteinID: ABI73161
UniProt: Q07XV3
Position
complement(3972874..3975177)
AA seq 767 aa
MSDAIELSLDGVEQMPLRRFTEGAYLNYSMYVIMDRALPHIGDGLKPVQRRIIYAMSELG
LSAQSKHKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPK
SFAAMRYTEARLSKFSEVLLSELGQGTVDWSPNFDGTMKEPVTLPARLPHILLNGITGIA
VGMATDIPPHNVHELVGACIELIDNPKADLARLMEFVPGPDYPTEAEIITPRADIERIYD
TGKGSIRARAVYSEEQGEIVITSLPHQASSGKILEQIANQMQAKKLPMVSDLRDESDHEN
PVRLVIVPRSNRIDCDQLMTHLFATTDLEKSFRVNLNVLGLDGRPKVKGLKQLLTEWLEF
RLTTVTRRLQYRLDKVLARLHILEALMVAFLNIDEVIEIIRYNDEPKAELMARFNLSDKQ
AESILELKLRHLAKLEEFKIKGEQDELAAERDKLELLLSSERRLKTLVKKELIQDGETYG
DNRRSPIIERVDAKALTEQELTPTESVTVVLSDKGWVRCAKGHDVDVEGLSYKSGDSYLC
SVMGKSNQAAVFIDSTGRAFATDSHTLPSARSQGEPITTRFNMAPGATMQHVLMGEDEQF
FLLATDAGYGFICAYPDLVSRNKAGKALLSLPTNALAMQPKLINKTADQSLLAITSEGRM
LMFSLDALPQLSKGKGNKIIGIPTDRAKNREELLLHLNVVPHNTAVTLWAGKRKLTLKPS
DLEHYRGERGRRGAKLPRGLQRVDSVDVEMGPLAEDGLQDDNLDIHE
NT seq 2304 nt   +upstreamnt  +downstreamnt
atgagtgatgcgattgaattaagccttgatggtgtagagcaaatgccgctgaggcgcttt
accgaaggggcttatttaaattattccatgtacgtgattatggatcgcgccctaccgcac
attggtgatggtctaaaacccgtccaacgacgcattatctatgcaatgagcgagttaggt
ttatctgcgcaatctaagcacaaaaaatcagcccgtactgtcggtgacgtgttaggtaaa
tatcacccgcatggtgatagtgcgtgttacgaagcgatggtgttaatggcgcagccattt
tcctatcgatatccgctggttgacggccaaggtaactggggcgcgccagatgatcctaag
tcatttgctgcaatgcgttataccgaagctagattatcaaagttttctgaagtgttactg
tcggaattaggacagggtaccgtagattggagccctaactttgatggcaccatgaaagag
cctgtaaccttaccagcacgattaccgcatatattattgaatggtattaccggtatcgcg
gttggcatggcaacggatattccgccgcataatgtgcatgaattagtgggcgcctgtata
gagctaatcgataatcctaaagcggatttagcacgcctaatggagtttgttccaggccct
gattacccaacagaagccgaaataattacccctagagctgatattgagcggatttatgat
acgggtaaaggctcaatcagggcgcgtgcagtttacagtgaagagcagggcgagattgtt
attacttcattaccgcatcaagccagtagcggtaagattttagaacaaattgccaatcaa
atgcaggcaaaaaagttgccgatggtgtctgatttacgtgatgaatctgatcatgaaaac
ccagtgcgattagtgattgtacctcgttcaaatcgcattgattgtgatcagctaatgacc
catttatttgcgacgacagatcttgaaaaaagcttccgagttaacctcaatgtgttgggg
ctcgacggccgtccgaaagtaaaagggctaaaacaactgttaactgagtggttagaattt
cgccttacaacagtcactcgccgcttgcaatatcgacttgataaagtattagcacggtta
catattttagaagcattaatggttgcgtttttaaacattgatgaagtgatcgaaattatt
cgttataacgacgaacctaaagctgagttgatggctcgctttaacttgtcggataaacaa
gctgaatcaattttagagttaaaattacgtcatttagccaagcttgaagaatttaaaatt
aaaggtgagcaagatgagcttgcggcagaacgtgacaaattagagttattgttaagctct
gaacgtcgcttgaaaaccttagtgaaaaaagaattgatccaagatggtgagacttatggt
gataatcgtcgttcgcctattattgaacgtgtagatgccaaagcgctgactgagcaagag
ttaacgccaacagagtctgtcactgttgtattgtctgataaaggctgggtacgttgcgct
aaaggccatgatgtcgatgtagaagggttatcgtataagtctggtgacagttatctttgt
agcgtgatgggcaagagtaaccaagccgcggtgtttattgattcgactggacgtgcattt
gccaccgacagccatacgttgccttcagcgcgaagccaaggcgagcctatcaccacacgc
tttaatatggcacctggcgcgacgatgcaacatgtgctcatgggcgaagatgaacagttc
ttcttgttggctaccgatgctggttatggctttatttgtgcttatccagatttggttagc
cgtaataaagccggtaaggcactactcagtctgccaaccaatgcgcttgctatgcagcca
aagttaatcaataaaacggcagatcagtcgttgttagcgattacctctgaaggccgaatg
ttgatgtttagtttagatgccttgccacagttatcaaaaggtaaaggcaacaagattatc
ggtattccaaccgatcgcgctaagaatcgtgaagagttacttttgcacttaaatgttgtg
ccgcataataccgcagtaactttgtgggctggtaagcgcaagctaaccttgaaaccaagc
gatttagagcactatcgtggtgagcgtggtcgtcgtggtgctaagttaccaagaggatta
caacgcgtagacagtgttgatgtcgaaatgggaccattggcagaagacggcttgcaagac
gataatctggatatacacgagtaa

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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