KEGG T03315: SFyv

Shigella flexneri Shi06HN006 (serotype Yv): SFyv_0524

Entry

SFyv_0524         CDS       T03315

Name

(GenBank) YbaU

K03770

peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]

Organism

sfs Shigella flexneri Shi06HN006 (serotype Yv)

Brite

KEGG Orthology (KO) [BR:sfs00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:sfs03110]
    SFyv_0524
Enzymes [BR:sfs01000]
5. Isomerases
  5.2  cis-trans-Isomerases
   5.2.1  cis-trans Isomerases (only sub-subclass identified to date)
    5.2.1.8  peptidylprolyl isomerase
     SFyv_0524
Chaperones and folding catalysts [BR:sfs03110]
Protein folding catalysts
  Peptidyl prolyl isomerase
   Cyclophilin
    SFyv_0524

SSDB

Motif

Pfam:

SurA_N_3 SurA_N_2 Rotamase_2 Rotamase Rotamase_3 SurA_N DUF4214

Other DBs

NCBI-ProteinID:

AIL39243

Position

396474..398345

AA seq 623 aa
MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNYAAKVNDQEISRGQFENAFN
SERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQA
IFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGET
DELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLVA
ATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALAK
EKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPAK
VKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAASNDTESLAGAEQAAGVKATQTGWFS
KDNLPEELNFKPVADAIFNGGLVGENGASGINSDIITVDGDRAFVLRVSEHKPEAVKPLA
DVQEQVKALVQHNKAEQQAKVDAEKLLVDLKAGKGAEAMQAAGLKFGEPKTLSRSGRDPI
SQAAFALPLPAKDKPSYGMATDMQGNVVLLALDEVKQGSMPEDQKKAMVQGITQNNAQIV
FEALMSNLRKEAKIKIGDALEQQ

NT seq 1872 nt +upstreamnt +downstreamnt
atgatggacagcttacgcacggctgcaaacagtctcgtgctcaagattattttcggtatc
attatcgtgtcgttcatattgaccggcgtgagtggttacctgattggcggaggcaataac
tacgccgcaaaagtgaatgaccaggaaatcagccgtgggcagttcgagaacgcctttaac
agcgagcgtaatcgtatgcagcaacagctgggcgatcaatactccgagctggcagcgaac
gaaggctatatgaaaaccctgcgtcaacaggtgctgaatcgtctgatcgacgaggcgctg
ttggatcagtacgctcgtgagctgaaactgggtatcagtgatgagcaggttaaacaggcg
attttcgcgaccccagccttccaggttgacggcaaatttgataacagccgctataacggt
atcctcaaccagatggggatgaccgccgatcagtacgcccaggcgctgcgtaaccagctc
actacccaacagctgattaacggcgttgccggtaccgattttatgctgaaaggtgaaacc
gacgagctggcggcactggtcgcgcaacaacgcgtggtgcgtgaggcgactatcgatgtt
aacgcgctggcggcgaagcagcctgtgaccgaacaggagattgccagctactacgaacaa
aacaaaaacaatttcatgacgccggaacaattccgcgtgagttacatcaagctggttgcc
gcaacgatgcagcaaccggttagcgatgcggatatccagagctactacgatcagcatcag
gatcaattcacccagccgcagcgtacccgctacagcatcatccagaccaaaactgaagat
gaagcgaaagcggtacttgatgagctgaataaaggcggtgattttgctgcattagccaaa
gaaaaatctgccgatattatctctgcccgtaacggcggcgatatgggttggttagaagat
gccactatccccgacgaactgaaaaatgctggtctgaaagaaaaaggccaactgtctggt
gtcatcaaatcttcggtcggtttcctgattgtacgtctggacgacattcagccagcgaaa
gtgaaatcgttagacgaagtacgtgacgacattgcggcgaaagtgaaacacgaaaaagcc
ctcgatgcgtactatgcgctgcagcagaaagtgagcgatgcggcaagcaacgacaccgag
tctctggccggtgcagagcaagctgccggcgttaaagccactcagacgggttggttcagc
aaagataacctgccggaagagttgaacttcaagccggttgccgacgctatctttaacggc
ggtctggtaggtgaaaacggcgcgtcgggcatcaactctgacatcatcaccgtagacggc
gaccgcgcattcgtgctgcgcgtcagcgagcacaaaccggaagcggtgaaaccgttggca
gatgttcaggaacaagttaaggcactggttcagcacaacaaagctgaacaacaggcgaaa
gtggatgctgagaaactgctggttgatttgaaagccggcaaaggtgcggaagctatgcag
gctgccggtctgaaatttggcgagccgaaaaccttaagccgttccggtcgtgacccgatt
agccaggcggcgtttgcactgccactgccagcgaaagacaaaccgagctacggtatggcg
accgatatgcaaggtaatgtggttctgctggcgctggatgaagtgaaacaaggttcaatg
ccggaagatcagaaaaaagcgatggtgcagggtatcacccagaacaacgcacaaatcgtc
tttgaagctctgatgagtaacctgcgtaaagaggcgaaaatcaaaattggcgatgcgctg
gaacagcaataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

Download RDF

DBGET integrated database retrieval system