KEGG   Shigella flexneri Shi06HN006 (serotype Yv): SFyv_4662
Entry
SFyv_4662         CDS       T03315                                 
Name
(GenBank) Transcription elongation protein nusA
  KO
K02600  transcription termination/antitermination protein NusA
Organism
sfs  Shigella flexneri Shi06HN006 (serotype Yv)
Brite
KEGG Orthology (KO) [BR:sfs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sfs03021]
    SFyv_4662
   03009 Ribosome biogenesis [BR:sfs03009]
    SFyv_4662
Transcription machinery [BR:sfs03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     SFyv_4662
Ribosome biogenesis [BR:sfs03009]
 Prokaryotic type
  rRNA transcription factors
   SFyv_4662
SSDB
Motif
Pfam: NusA_N KH_5 HHH_5 S1 KH_2 S1_2 KhpA-B_KH
Other DBs
NCBI-ProteinID: AIL42456
Position
complement(3332424..3333911)
AA seq 495 aa
MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVQIDRKSGDFDTFR
RWLVVDEVTQPTKEITLEAARYEDESLNLGDYVEDQIESVTFDRITTQTAKQVIVQKVRE
AERAMVVDQFREHEGEIITGVVKKVNRDNISLDLGNNAEAVILREDMLPRENFRPGDRVR
GVLYSVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKT
NDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDE
DKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAIDTFT
KYLDIDEDFATVLVEEGFSTLEELAYVPMKELLEIEGLDEPTVEALRERAKNALATIAQA
QEESLGDNKPADDLLNLEGVDRDLAFKLAARGVCTLEDLAEQGIDDLADIEGLTDEKAGA
LIMAARNICWFGDEA
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgaacaaagaaattttggctgtagttgaagccgtatccaatgaaaaggcgctacctcgc
gagaagattttcgaagcattggaaagcgcgctggcgacagcaacaaagaaaaaatatgag
caagagatcgacgtccgtgtacagatcgatcgcaaaagcggtgattttgacaccttccgt
cgctggttagttgttgatgaagtcacccagccgaccaaggaaatcacccttgaagccgca
cgttatgaagatgaaagcctgaacttgggcgattacgttgaagatcagattgagtctgtt
acctttgaccgtatcaccacccagacggcaaaacaggttatcgtgcagaaagtgcgtgaa
gccgaacgtgcgatggtggttgatcagttccgtgaacacgaaggtgaaatcatcaccggc
gtggtgaaaaaagtaaaccgcgacaacatctctctggatctgggcaacaacgctgaagcc
gtgatcctgcgcgaagatatgctgccgcgtgaaaacttccgccctggcgaccgcgttcgt
ggcgtgctttattccgttcgcccggaagcgcgtggcgcgcaactgttcgtcactcgttcc
aagccggaaatgctgatcgaactgttccgtattgaagtgccggaaatcggcgaagaagtg
attgaaattaaagcagcggctcgcgacccgggttctcgtgcgaaaatcgcggtgaaaacc
aacgataaacgtatcgatccggtaggtgcttgcgtaggtatgcgtggcgcgcgtgttcag
gcggtttctactgaactgggcggcgagcgtatcgatatcgtcctgtgggatgataacccg
gcgcagtttgtgattaacgcaatggcaccggcagacgttgcttctatcgtggtggatgaa
gataaacacaccatggatatcgccgttgaagctggtaacctggcgcaggcgattggccgt
aacggtcagaacgtgcgtctggcttcgcagctgagcggttgggaactcaacgtaatgacc
gttgacgacctgcaggctaagcatcaggcggaagcgcacgcagcgatcgacaccttcacc
aaatatctcgacatcgacgaagacttcgcgactgttctggtagaagaaggtttctcgacg
ctggaagaactggcctatgtgccgatgaaagagctgttggaaatcgaaggccttgatgag
ccgaccgttgaagcactgcgcgagcgtgctaaaaatgcactggccaccattgcacaggcc
caggaagaaagcctcggtgataacaaaccggctgacgatctgctgaaccttgaaggggta
gatcgtgatttggcattcaaactggccgcccgtggcgtttgtacgctggaagatctcgcc
gaacagggcattgatgatctggctgatatcgaagggttgaccgacgaaaaagccggagca
ctgattatggctgcccgtaatatttgctggttcggtgacgaagcgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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